RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 MUSKO15146 869 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 IFNW1P05000 195 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 ARSAP15289 507 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 HMGCLP35914 325 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 SLC1A2P43004 574 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 RPS14P62263 151 aaKnown RBP13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 ENPP2Q13822 863 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 ELOA3BQ3SY89 546 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 ELOA3Q8NG57 546 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 NANOS1Q8WY41 292 aaKnown RBP13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 MYDGFQ969H8 173 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 MGME1Q9BQP7 344 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 LY75O60449 1722 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 MMP2P08253 660 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 CCNA2P20248 432 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 CTBP2P56545 445 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 GPLD1P80108 840 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 SLC5A9Q2M3M2 681 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 STK32CQ86UX6 486 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 DEFB119Q8N690 84 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 OR4K14Q8NGD5 310 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 CKAP2Q8WWK9 683 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 EXOSC4Q9NPD3 245 aaKnown RBP13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 SLC39A1Q9NY26 324 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 OR6C74A6NCV1 312 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 FOXE1O00358 373 aaPredicted RBP13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 TCN1P20061 433 aaPredicted RBP13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 PGDP52209 483 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 HSD17B7P56937 341 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 CA9Q16790 459 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 RNF111Q6ZNA4 994 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 ATCAYQ86WG3 371 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 CSNK1A1LQ8N752 337 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 WDR36Q8NI36 951 aaKnown RBP13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 TGM7Q96PF1 710 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 ATXN10Q9UBB4 475 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 TFR2Q9UP52 801 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 IFT52Q9Y366 437 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 COL24A1Q17RW2 1714 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 RREB1Q92766 1687 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 ADAMDEC1O15204 470 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 SLITRK5O94991 958 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 SEMA3DO95025 777 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 FARS2O95363 451 aaKnown RBP13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 POLR2CP19387 275 aaPredicted RBP13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 FECHP22830 423 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 BMP8BP34820 402 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 VHLP40337 213 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 EIF3IQ13347 325 aaKnown RBP13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 MAPK14Q16539 360 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 ARL9Q6T311 187 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 NPAS3Q8IXF0 933 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 ESX1Q8N693 406 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 HPS4Q9NQG7 708 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 TMEM5Q9Y2B1 443 aa13.06□□□□□ -0.32
PRPF38A-201ENST00000257181 C1orf226A1L170 272 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 AQP9O43315 295 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 TIMMDC1Q9NPL8 285 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 FAM120CQ9NX05 1096 aaKnown RBP13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 ALKBH4Q9NXW9 302 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 CCDC167Q9P0B6 97 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 LGALS13Q9UHV8 139 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 GLS2Q9UI32 602 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 ZNF844Q08AG5 666 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 DYNC1I2Q13409 638 aaKnown RBP13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 CNTD1Q8N815 330 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 SMYD1Q8NB12 490 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 FAM13CQ8NE31 585 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 HEBP1Q9NRV9 189 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 TMEM98Q9Y2Y6 226 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 WNK3Q9BYP7 1800 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 RNF225M0QZC1 329 aaPredicted RBP13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 ARHGEF9O43307 516 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 KCNJ5P48544 419 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 RPS6KA3P51812 740 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 RASGEF1BQ0VAM2 473 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 CCDC81Q6ZN84 652 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 USP53Q70EK8 1073 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 UTP15Q8TED0 518 aaKnown RBP13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 DNAJC9Q8WXX5 260 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 RFKQ969G6 155 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 CLCC1Q96S66 551 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 DUSP26Q9BV47 211 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 OARD1Q9Y530 152 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 DOCK1Q14185 1865 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 MAGEB17A8MXT2 336 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 RSL1D1O76021 490 aaKnown RBP13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 F11P03951 625 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 BMP4P12644 408 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 PRG2P13727 222 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 ZNF823P16415 610 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 SEPHS1P49903 392 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 HTRA4P83105 476 aaPredicted RBP13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 SMU1Q2TAY7 513 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 TRIM61Q5EBN2 209 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 ZBTB49Q6ZSB9 765 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 MFSD2AQ8NA29 543 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 THSD1Q9NS62 852 aa13.05□□□□□ -0.32
PRPF38A-201ENST00000257181 FARSBQ9NSD9 589 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms