RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 CCNFP41002 786 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 ROR2Q01974 943 aaKnown RBP18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 LRRTM4Q86VH4 590 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 ARMC10Q8N2F6 343 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 CMASQ8NFW8 434 aaPredicted RBP18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 NCSTNQ92542 709 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 CLCC1Q96S66 551 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 KXD1Q9BQD3 176 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 B3GNT4Q9C0J1 378 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 RNF11Q9Y3C5 154 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 PRMT3O60678 531 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 RAP2AP10114 183 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 CYP1B1Q16678 543 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 MBOAT1Q6ZNC8 495 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 C14orf80Q86SX3 495 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 NFKBIDQ8NI38 313 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 PEBP4Q96S96 227 aa18.24■□□□□ 0.51
SMARCC1-201ENST00000254480 A0A1W2PRG6 482 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 DLX3O60479 287 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 SLC25A11Q02978 314 aaKnown RBP18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 CANT1Q8WVQ1 401 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 NUSAP1Q9BXS6 441 aaKnown RBP18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 MUC13Q9H3R2 512 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 KAT6AQ92794 2004 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 GRXCR1A8MXD5 290 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 MTRF1O75570 445 aaKnown RBP18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 ITGB1P05556 798 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 SYT16Q17RD7 645 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 CNKSR3Q6P9H4 555 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 GOLGA7Q7Z5G4 137 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 POF1BQ8WVV4 589 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 LRRC58Q96CX6 371 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 TCF7L1Q9HCS4 588 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 RHCGQ9UBD6 479 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 A0A1W2PQ72 361 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 EIF1AYO14602 144 aaKnown RBP18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 XRCC1P18887 633 aaPredicted RBP18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 PRDX6P30041 224 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 LY6G5CQ5SRR4 150 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 ZNF627Q7L945 461 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 SH3D21A4FU49 640 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 TNFP01375 233 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 HOXB2P14652 356 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 HADHBP55084 474 aaKnown RBP18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 GPX6P59796 221 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 PUS10Q3MIT2 529 aaKnown RBP18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 ABHD13Q7L211 337 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 POLR2J2Q9GZM3 115 aaKnown RBP18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 SLC32A1Q9H598 525 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 ETAA1Q9NY74 926 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 PRKD3O94806 890 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 VIPR1P32241 457 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 CCR3P51677 355 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 DSTNP60981 165 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 DSC3Q14574 896 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 HMGN2P46Q86SG4 172 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 RGMAQ96B86 450 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 ZSWIM3Q96MP5 696 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 SEC61A2Q9H9S3 476 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 GRIP1Q9Y3R0 1128 aa18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 SPIN1Q9Y657 262 aaPredicted RBP18.23■□□□□ 0.51
SMARCC1-201ENST00000254480 RB1P06400 928 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 LIN52Q52LA3 116 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 MOCOSQ96EN8 888 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 TLR9Q9NR96 1032 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 OAZ3Q9UMX2 235 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 FKBP7Q9Y680 259 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 ZNF208O43345 1280 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 XKP51811 444 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 FRG2Q64ET8 278 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 WFIKKN2Q8TEU8 576 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 FRG2BQ96QU4 278 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 TMEM109Q9BVC6 243 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 PRAMEF12O95522 483 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 AGTR2P50052 363 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 RPS13P62277 151 aaKnown RBP18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 ASTE1Q2TB18 679 aaPredicted RBP18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 SVOPLQ8N434 492 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 TFGQ92734 400 aaPredicted RBP18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 GPN1Q9HCN4 374 aaPredicted RBP18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 CDC123O75794 336 aaPredicted RBP18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 CDH15P55291 814 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 RAB43Q86YS6 212 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 C12orf76Q8N812 135 aaPredicted RBP18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 SOX14O95416 240 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 CSNK2A2P19784 350 aaPredicted RBP18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 CXCR1P25024 350 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 BCAP31P51572 246 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 KCNJ11Q14654 390 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 ZFP69Q49AA0 526 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 REM2Q8IYK8 340 aaPredicted RBP18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 CELF5Q8N6W0 485 aaKnown RBP18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 DOK4Q8TEW6 326 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 TRIM2Q9C040 744 aa18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 SSU72Q9NP77 194 aaKnown RBP18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 MKKSQ9NPJ1 570 aaPredicted RBP18.22■□□□□ 0.51
SMARCC1-201ENST00000254480 MTMR11A4FU01 709 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 AP2S1P53680 142 aaPredicted RBP18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 GMFBP60983 142 aa18.21■□□□□ 0.51
SMARCC1-201ENST00000254480 UFD1Q92890 307 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms