RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TTC24A2A3L6 582 aaPredicted RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 OR51F1A6NGY5 319 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 PDPK1O15530 556 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 AHSGP02765 367 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 MAPK12P53778 367 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 CD300CQ08708 224 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TSNQ15631 228 aaKnown RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 USP39Q53GS9 565 aaKnown RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 ALFQ53S48 1182 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 ZNF776Q68DI1 518 aaPredicted RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 ARHGAP36Q6ZRI8 547 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 ATG16L2Q8NAA4 619 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 OR8H1Q8NGG4 311 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 FBXO30Q8TB52 745 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TWIST2Q8WVJ9 160 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 CENPIQ92674 756 aaPredicted RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 PHOX2BQ99453 314 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 KXD1Q9BQD3 176 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 ZSCAN5AQ9BUG6 496 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 SMG9Q9H0W8 520 aaKnown RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 ALG2Q9H553 416 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 DNAJC11Q9NVH1 559 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 GTF2A1LQ9UNN4 478 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 GMPPBQ9Y5P6 360 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 ARPC2O15144 300 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 UPK1BO75841 260 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 RPL3P39023 403 aaKnown RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 SEMG2Q02383 582 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 ZNF45Q02386 682 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 OLIG2Q13516 323 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TAB1Q15750 504 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 PLEKHG6Q3KR16 790 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TBRG1Q3YBR2 411 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 ARSIQ5FYB1 569 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TMEM220Q6QAJ8 160 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.72□□□□□ -0.694e-9■■■■■ 46.3
COPA-201ENST00000241704 SNX20Q7Z614 316 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 OR2AP1Q8NGE2 309 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 AIF1LQ9BQI0 150 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 CENPOQ9BU64 300 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 RSPH9Q9H1X1 276 aaPredicted RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 IPPKQ9H8X2 491 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 ANKRD66B4E2M5 251 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 BCKDKO14874 412 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 RECQL5O94762 991 aaPredicted RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 PSMA3P25788 255 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 CASP3P42574 277 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 LIPEQ05469 1076 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 FOXM1Q08050 763 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TUBB3Q13509 450 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 ATP6AP1Q15904 470 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 RAB6CQ53S08 254 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 Q6ZVU0 165 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 PLEKHM3Q6ZWE6 761 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TMCO2Q7Z6W1 182 aaPredicted RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 MAPK15Q8TD08 544 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 RAB6CQ9H0N0 254 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 DSN1Q9H410 356 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TOR3AQ9H497 397 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TFB2MQ9H5Q4 396 aaKnown RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 ENPP5Q9UJA9 477 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 A8MV72 311 aaPredicted RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 COCHO43405 550 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 CNPP09543 421 aaKnown RBP10.72□□□□□ -0.69
COPA-201ENST00000241704 IL32P24001 234 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 GNPDA1P46926 289 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 ALDH3A2P51648 485 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 SELENBP1Q13228 472 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 SPCS2Q15005 226 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 VPS26BQ4G0F5 336 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 CCDC58Q4VC31 144 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 RTP2Q5QGT7 225 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 FAM171BQ6P995 826 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 BHLHB9Q6PI77 547 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 ENPP7Q6UWV6 458 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 USP43Q70EL4 1123 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 DCAF4L2Q8NA75 395 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 PIK3C3Q8NEB9 887 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 METTL21AQ8WXB1 218 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 SNX18Q96RF0 628 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 GPR22Q99680 433 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TTYH2Q9BSA4 534 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TTLL2Q9BWV7 592 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TIMM22Q9Y584 194 aa10.72□□□□□ -0.69
COPA-201ENST00000241704 TCRBV3S1A0A5B6 114 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 CPED1A4D0V7 1026 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 NEMP2A6NFY4 417 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 OR6C70A6NIJ9 312 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 LEFTY2O00292 366 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 WNT9AO14904 365 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 TULP3O75386 442 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 OR6A2O95222 327 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 CD36P16671 472 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 ITPKAP23677 461 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 NOS3P29474 1203 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 IDUAP35475 653 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 SLC15A1P46059 708 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 IRF9Q00978 393 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 NDUFA9Q16795 377 aa10.71□□□□□ -0.69
COPA-201ENST00000241704 MINDY4Q4G0A6 757 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms