RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 GFAPP14136 432 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 ATP5C1P36542 298 aaKnown RBP7.71□□□□□ -1.18
CXCR4-201ENST00000241393 GNALP38405 381 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 TTPAP49638 278 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 RAC3P60763 192 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 APOFQ13790 326 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 GBX1Q14549 363 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 PFKFB4Q16877 469 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 KIF19Q2TAC6 998 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 C6orf10Q5SRN2 563 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 IL23RQ5VWK5 629 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 CLEC6AQ6EIG7 209 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 LCN8Q6JVE9 175 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 FUT10Q6P4F1 479 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 CIR1Q86X95 450 aaPredicted RBP7.71□□□□□ -1.18
CXCR4-201ENST00000241393 ADGRG2Q8IZP9 1017 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 FBXO39Q8N4B4 442 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 PRR18Q8N4B5 295 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 RNF148Q8N7C7 305 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 OR13C4Q8NGS5 318 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 OR2T34Q8NGX1 318 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 OR2T3Q8NH03 318 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 NAT14Q8WUY8 206 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 ATP6V1E2Q96A05 226 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 EME1Q96AY2 570 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 DGCR14Q96DF8 476 aaKnown RBP7.71□□□□□ -1.18
CXCR4-201ENST00000241393 C3orf30Q96M34 536 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 PRICKLE1Q96MT3 831 aaPredicted RBP7.71□□□□□ -1.18
CXCR4-201ENST00000241393 SEPT5Q99719 369 aaPredicted RBP7.71□□□□□ -1.18
CXCR4-201ENST00000241393 TDRD1Q9BXT4 1180 aaKnown RBP7.71□□□□□ -1.18
CXCR4-201ENST00000241393 TRIM54Q9BYV2 358 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 DMRT3Q9NQL9 472 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 TLR9Q9NR96 1032 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 LANCL2Q9NS86 450 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 TMEM140Q9NV12 185 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 MARCH5Q9NX47 278 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 HSFX1Q9UBD0 423 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 GREB1Q4ZG55 1949 aa7.71□□□□□ -1.18
CXCR4-201ENST00000241393 A0A1B0GVM2 712 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 H3BMM5 538 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 CCL22O00626 93 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 PIP5K1BO14986 540 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 ANGPT2O15123 496 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 HNRNPRO43390 633 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 VPS26AO75436 327 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 TOX4O94842 621 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 VNN2O95498 520 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 ESRRBO95718 433 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 NPPAP01160 153 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 TFAP2AP05549 437 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 HMBSP08397 361 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 UROSP10746 265 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 PKMP14618 531 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 PSMC3P17980 439 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 MSX2P35548 267 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 TUFMP49411 452 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SLC7A2P52569 658 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 CDH13P55290 713 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 POLE2P56282 527 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 GALNT3Q14435 633 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 RBBP5Q15291 538 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 CCDC157Q569K6 752 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 IL31Q6EBC2 164 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 RPS27LQ71UM5 84 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 GLT6D1Q7Z4J2 308 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 DENND1CQ8IV53 801 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 HERC6Q8IVU3 1022 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 CHERPQ8IWX8 916 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 STK40Q8N2I9 435 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 KCNJ9Q92806 393 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SLC45A3Q96JT2 553 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 CASD1Q96PB1 797 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 HAUS8Q9BT25 410 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 TTPALQ9BTX7 342 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 ADGRE3Q9BY15 652 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 PCDHAC1Q9H158 963 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 AIG1Q9NVV5 245 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 UBAP1Q9NZ09 502 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 PTTG2Q9NZH5 202 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 ACTR3BQ9P1U1 418 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 THEGQ9P2T0 379 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 POLG2Q9UHN1 485 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 LZTS1Q9Y250 596 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 MED16Q9Y2X0 877 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 PCDHB7Q9Y5E2 793 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 A0A0D9SEW6 157 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 A0A1W2PP18 115 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 KANSL1LA0AUZ9 987 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 C2orf78A6NCI8 922 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SUPT3HB4E1H0 165 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 H3BML4 177 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 FXYD1O00168 92 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 NR5A2O00482 541 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SUPT3HO75486 399 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 ECI2O75521 394 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SIX3O95343 332 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 LATS1O95835 1130 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 GPIP06744 558 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 RHOCP08134 193 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms