RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PDGFDQ9GZP0 370 aaPredicted RBP12.68□□□□□ -0.38
MSH2-201ENST00000233146 HAPLN2Q9GZV7 340 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 CASS4Q9NQ75 786 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 PLCXD1Q9NUJ7 323 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 PTTG3PQ9NZH4 202 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 MBD2Q9UBB5 411 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 STYXL1Q9Y6J8 313 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 SESN1Q9Y6P5 492 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 FAM95CA0A1B0GW59 222 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 A8MXK9 166 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 DHX15O43143 795 aaKnown RBP12.68□□□□□ -0.38
MSH2-201ENST00000233146 ORC5O43913 435 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 TGM6O95932 706 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 FGF4P08620 206 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 ABATP80404 500 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 UGCGQ16739 394 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 CERCAMQ5T4B2 595 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 DLEU7Q6UYE1 221 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 JAZF1Q86VZ6 243 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 TWIST2Q8WVJ9 160 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 SLC5A11Q8WWX8 675 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 P2RY11Q96G91 374 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 GFM1Q96RP9 751 aaKnown RBP12.68□□□□□ -0.38
MSH2-201ENST00000233146 CD244Q9BZW8 370 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 VNN3Q9NY84 501 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 CTSFQ9UBX1 484 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 TSR3Q9UJK0 312 aaKnown RBP12.68□□□□□ -0.38
MSH2-201ENST00000233146 HNRNPCL2B2RXH8 293 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 SIGLEC6O43699 453 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 PTHP01270 115 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 IL2RBP14784 551 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 MTPNP58546 118 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 PUDPQ08623 228 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 CPZQ66K79 652 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 NCBP2-AS2Q69YL0 99 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 TRMT1LQ7Z2T5 733 aaKnown RBP12.68□□□□□ -0.38
MSH2-201ENST00000233146 METTL23Q86XA0 190 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 SLC22A9Q8IVM8 553 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 ENTHD1Q8IYW4 607 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 PGBD5Q8N414 524 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 CHCHD4Q8N4Q1 142 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 USP7Q93009 1102 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 MED9Q9NWA0 146 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 POLG2Q9UHN1 485 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 KCNK7Q9Y2U2 307 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 MAB21L2Q9Y586 359 aa12.68□□□□□ -0.38
MSH2-201ENST00000233146 CA12O43570 354 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 CHP2O43745 196 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 HLA-DQB1P01920 261 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 NMBRP28336 390 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 SOX10P56693 466 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 TAS2R39P59534 338 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 SH3BP2P78314 561 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 LGALSLQ3ZCW2 172 aaPredicted RBP12.67□□□□□ -0.38
MSH2-201ENST00000233146 MLIPQ5VWP3 458 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 C17orf107Q6ZR85 190 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 USP45Q70EL2 814 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 C4orf19Q8IY42 314 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 ZNF567Q8N184 647 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 DPP10Q8N608 796 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 PITX2Q99697 317 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 ASPNQ9BXN1 380 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 TUBB1Q9H4B7 451 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 KCTD5Q9NXV2 234 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 MAP3K20Q9NYL2 800 aaKnown RBP12.67□□□□□ -0.38
MSH2-201ENST00000233146 COPZ2Q9P299 210 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 NLKQ9UBE8 527 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 UBA6A0AVT1 1052 aaPredicted RBP12.67□□□□□ -0.38
MSH2-201ENST00000233146 FABP12A6NFH5 140 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 E9PQ18 207 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 CBX4O00257 560 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 PLATP00750 562 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 POU2F1P14859 743 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 RAB13P51153 203 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 RORCP51449 518 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 POLR2JP52435 117 aaKnown RBP12.67□□□□□ -0.38
MSH2-201ENST00000233146 UFM1P61960 85 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 PABPC1L2AQ5JQF8 200 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 KIAA1614Q5VZ46 1190 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 MZT2BQ6NZ67 158 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 DET1Q7L5Y6 550 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 CHMP1BQ7LBR1 199 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 GPR155Q7Z3F1 870 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 STPG2Q8N412 459 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 DCBLD1Q8N8Z6 715 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 ATG16L2Q8NAA4 619 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 OR52E4Q8NGH9 312 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 GGHQ92820 318 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 L3HYPDHQ96EM0 354 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 MYO19Q96H55 970 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 PIWIL1Q96J94 861 aaKnown RBP12.67□□□□□ -0.38
MSH2-201ENST00000233146 COL21A1Q96P44 957 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 GPR63Q9BZJ6 419 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 ACTR10Q9NZ32 417 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 IQCMA0A1B0GVH7 501 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 HLA-EP13747 358 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 ADRA1BP35368 520 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 TKTL1P51854 596 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 HSF2Q03933 536 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 IFRD2Q12894 506 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms