RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CSNK2A2P19784 350 aaPredicted RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 EDNRAP25101 427 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 HSD11B1P28845 292 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 EIF2S3P41091 472 aaKnown RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 ACTR1BP42025 376 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 EEFSECP57772 596 aaKnown RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 ACTR1AP61163 376 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 ACSBG2Q5FVE4 666 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 LRRC70Q7Z2Q7 622 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 LRRC58Q96CX6 371 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 COL21A1Q96P44 957 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 TPD52L2O43399 206 aaKnown RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 PLGP00747 810 aaPredicted RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 ITGB1P05556 798 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 FUT4P22083 530 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 IL1R2P27930 398 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 RPS24P62847 133 aaKnown RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 DAG1Q14118 895 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 HERC3Q15034 1050 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 PRAMEF17Q5VTA0 474 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 TPGS2Q68CL5 300 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 DGLUCYQ7Z3D6 616 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 PLCZ1Q86YW0 608 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 LNX2Q8N448 690 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 FAM210AQ96ND0 272 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 LYARQ9NX58 379 aaKnown RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 DKK3Q9UBP4 350 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 A0A0G2JLL6 359 aaPredicted RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 AGR2O95994 175 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 KLK1P06870 262 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 ZNF12P17014 697 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 HMGCS1Q01581 520 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 ENPP2Q13822 863 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 C4orf46Q504U0 113 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 SYPL2Q5VXT5 272 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 PRRT2Q7Z6L0 340 aaPredicted RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 GALNT15Q8N3T1 639 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 NTAN1Q96AB6 310 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 FZD8Q9H461 694 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 SLC32A1Q9H598 525 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 BCAS3Q9H6U6 928 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 AKTIPQ9H8T0 292 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 PTTG2Q9NZH5 202 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 MED11Q9P086 117 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 TBX1O43435 398 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 TBX18O95935 607 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 HMGN1P05114 100 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 CSN2P05814 226 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 KLHL26Q53HC5 615 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 PPP2R2DQ66LE6 453 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 PAMR1Q6UXH9 720 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 ZNF782Q6ZMW2 699 aaPredicted RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 PNLDC1Q8NA58 520 aaKnown RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 GEMIN6Q8WXD5 167 aaKnown RBP11.28□□□□□ -0.6
LAMA4-201ENST00000230538 TAMM41Q96BW9 452 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 KCTD7Q96MP8 289 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 DMAC2Q9NW81 257 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 GIN1Q9NXP7 522 aa11.28□□□□□ -0.6
LAMA4-201ENST00000230538 CLIC1O00299 241 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 SRPRAP08240 638 aaKnown RBP11.27□□□□□ -0.6
LAMA4-201ENST00000230538 CASRP41180 1078 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 GRIA1P42261 906 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 AP2S1P53680 142 aaPredicted RBP11.27□□□□□ -0.6
LAMA4-201ENST00000230538 LGI4Q8N135 537 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 C11orf84Q9BUA3 381 aaPredicted RBP11.27□□□□□ -0.6
LAMA4-201ENST00000230538 ZSCAN5AQ9BUG6 496 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 ROBO1Q9Y6N7 1651 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 METTL21EPA6NDL7 271 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 GLTPD2A6NH11 291 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 AQP12BA6NM10 295 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 TNFP01375 233 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 ACRP10323 421 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 ATF6P18850 670 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 SLC6A9P48067 706 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 BTN3A2P78410 334 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 TMEM198Q66K66 360 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 ZNF572Q7Z3I7 529 aaPredicted RBP11.27□□□□□ -0.6
LAMA4-201ENST00000230538 AQP12AQ8IXF9 295 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 CYB5D2Q8WUJ1 264 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 ACDQ96AP0 544 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 ADAD1Q96M93 576 aaKnown RBP11.27□□□□□ -0.6
LAMA4-201ENST00000230538 PCDHGB1Q9Y5G3 927 aa11.27□□□□□ -0.6
LAMA4-201ENST00000230538 OR2AT4A6NND4 320 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 OR7A10O76100 309 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 BCHEP06276 602 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 NDUFS1P28331 727 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 SLC6A4P31645 630 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 DSC3Q14574 896 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 NATD1Q8N6N6 113 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 CMTM7Q96FZ5 175 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 PSKH2Q96QS6 385 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 EFCAB11Q9BUY7 163 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 SLC22A4Q9H015 551 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 ITM2CQ9NQX7 267 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 ASB3Q9Y575 518 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 NEMP2A6NFY4 417 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 TULP2O00295 520 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 NRP1O14786 923 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 ARPC2O15144 300 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 ACOX3O15254 700 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms