RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 CTF1Q16619 201 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 LINGO4Q6UY18 593 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 GPRIN3Q6ZVF9 776 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 MUL1Q969V5 352 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 MED30Q96HR3 178 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 SLC39A8Q9C0K1 460 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 INTS6Q9UL03 887 aaKnown RBP11.23□□□□□ -0.61
CCND1-201ENST00000227507 MYO7AQ13402 2215 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 SNTNA6NMZ2 147 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 ZNF487B1APH4 448 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 CXCR6O00574 342 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 SEC22BO75396 215 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 EPHX1P07099 455 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 HRH2P25021 359 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 GDI1P31150 447 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 SOX6P35712 828 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 SLC26A3P40879 764 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 CASP3P42574 277 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 IL10RBQ08334 325 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 KRR1Q13601 381 aaKnown RBP11.23□□□□□ -0.61
CCND1-201ENST00000227507 OR4D1Q15615 310 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 SOWAHCQ53LP3 525 aaPredicted RBP11.23□□□□□ -0.61
CCND1-201ENST00000227507 KIAA0930Q6ICG6 404 aaPredicted RBP11.23□□□□□ -0.61
CCND1-201ENST00000227507 CADM2Q8N3J6 435 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 PMEPA1Q969W9 287 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 HMCESQ96FZ2 354 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 REXO5Q96IC2 774 aaKnown RBP11.23□□□□□ -0.61
CCND1-201ENST00000227507 TRMT61BQ9BVS5 477 aaKnown RBP11.23□□□□□ -0.61
CCND1-201ENST00000227507 TOR4AQ9NXH8 423 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 TBX21Q9UL17 535 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 SNX6Q9UNH7 406 aa11.23□□□□□ -0.61
CCND1-201ENST00000227507 M0QX08 132 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 GABRDO14764 452 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 MATN3O15232 486 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 TNFRSF21O75509 655 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 PRSS56P0CW18 603 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 HOXB8P17481 243 aaPredicted RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 KCTD11Q693B1 232 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 ARMC6Q6NXE6 501 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 SLC16A12Q6ZSM3 486 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 TTC29Q8NA56 475 aaPredicted RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 OR56A4Q8NGH8 313 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 WFIKKN2Q8TEU8 576 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 DUS3LQ96G46 650 aaKnown RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 Q96MT0 163 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 ASB2Q96Q27 587 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 VPS35Q96QK1 796 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 TNKS2Q9H2K2 1166 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 NUP214P35658 2090 aaPredicted RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 TRIP11Q15643 1979 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 SAGE2PA6NJ88 616 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 LRATO95237 230 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 ARNTP27540 789 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 AQP1P29972 269 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 SUZ12Q15022 739 aaKnown RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 MED22Q15528 200 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 C10orf62Q5T681 223 aaPredicted RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 STK40Q8N2I9 435 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 C12orf76Q8N812 135 aaPredicted RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 CYP2S1Q96SQ9 504 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 ZNF717Q9BY31 904 aaPredicted RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 TUBB1Q9H4B7 451 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 CPNE5Q9HCH3 593 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 KRT84Q9NSB2 600 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 IMPAD1Q9NX62 359 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 TAS2R13Q9NYV9 303 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 NME7Q9Y5B8 376 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 CD3EAPO15446 510 aaKnown RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 CSF2P04141 144 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 JUNBP17275 347 aaPredicted RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 LPOP22079 712 aaPredicted RBP11.22□□□□□ -0.61
CCND1-201ENST00000227507 PTGS2P35354 604 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 WASP42768 502 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 INPP1P49441 399 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 ARL4DP49703 201 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 PTGR1Q14914 329 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 PTPRNQ16849 979 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 TBRG1Q3YBR2 411 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 ARMCX4Q5H9R4 360 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 LYSMD2Q8IV50 215 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 RGL4Q8IZJ4 473 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 OR13C4Q8NGS5 318 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 TMEM159Q96B96 161 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 HOXD1Q9GZZ0 328 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 MUC13Q9H3R2 512 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 ASB8Q9H765 288 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 ABCB8Q9NUT2 735 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 FKBP14Q9NWM8 211 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 WWOXQ9NZC7 414 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 ABCD2Q9UBJ2 740 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 ARL5AQ9Y689 179 aa11.22□□□□□ -0.61
CCND1-201ENST00000227507 TGM5O43548 720 aa11.21□□□□□ -0.61
CCND1-201ENST00000227507 VPS4BO75351 444 aa11.21□□□□□ -0.61
CCND1-201ENST00000227507 OR56A5P0C7T3 313 aa11.21□□□□□ -0.61
CCND1-201ENST00000227507 GRK3P35626 688 aa11.21□□□□□ -0.61
CCND1-201ENST00000227507 IL12RB1P42701 662 aa11.21□□□□□ -0.61
CCND1-201ENST00000227507 DGKEP52429 567 aa11.21□□□□□ -0.61
CCND1-201ENST00000227507 PKDCCQ504Y2 493 aa11.21□□□□□ -0.61
CCND1-201ENST00000227507 SPATA19Q7Z5L4 167 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms