RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TRNT1Q96Q11 434 aaKnown RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 TNFRSF12AQ9NP84 129 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 PAK1IP1Q9NWT1 392 aaPredicted RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 ERVK13-1Q9NX77 482 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 ENTPD4Q9Y227 616 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SPIN1Q9Y657 262 aaPredicted RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 UBFD1O14562 309 aaKnown RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 STSP08842 583 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 ALPPL2P10696 532 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 HSD17B1P14061 328 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 MATN1P21941 496 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 PURAQ00577 322 aaKnown RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SELPLGQ14242 412 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 PM20D1Q6GTS8 502 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SNX20Q7Z614 316 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SCD5Q86SK9 330 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 IGFN1Q86VF2 1251 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 OR13J1Q8NGT2 312 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 RAD51AP1Q96B01 352 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 EGLN2Q96KS0 407 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 MRPL9Q9BYD2 267 aaKnown RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 YTHDF1Q9BYJ9 559 aaKnown RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 GPR62Q9BZJ7 368 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 ZCCHC2Q9C0B9 1178 aaKnown RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SMG9Q9H0W8 520 aaKnown RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 POLR2J3Q9H1A7 115 aaKnown RBP13.39□□□□□ -0.27
NFKB1-201ENST00000226574 SLC32A1Q9H598 525 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 FAIMQ9NVQ4 179 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 RNF6Q9Y252 685 aa13.39□□□□□ -0.27
NFKB1-201ENST00000226574 MYADML2A6NDP7 307 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 CCRL2O00421 344 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 ZW10O43264 779 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 PCDH7O60245 1069 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 UGT2B17O75795 530 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 PAPSS2O95340 614 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 HTR1EP28566 365 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 SLC15A1P46059 708 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 ANXA11P50995 505 aaKnown RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 ITGA1P56199 1179 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 MZT2BQ6NZ67 158 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 UMODL1-AS1Q8N2C9 162 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 RPL3LQ92901 407 aaKnown RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 C11orf24Q96F05 449 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 C8orf48Q96LL4 319 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 COL21A1Q96P44 957 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 ZNF347Q96SE7 839 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 CLEC4MQ9H2X3 399 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 OAS3Q9Y6K5 1087 aaKnown RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 ONECUT3O60422 494 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 NME6O75414 186 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 DNTTP04053 509 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 PHC1P78364 1004 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 FOXM1Q08050 763 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 ST3GAL4Q11206 333 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 NIPAL1Q6NVV3 410 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 SERPINA13PQ6UXR4 307 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 Q6ZVU0 165 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 FUNDC1Q8IVP5 155 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 CLECL1Q8IZS7 167 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 KRT78Q8N1N4 520 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 NETO1Q8TDF5 533 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 TSPAN18Q96SJ8 248 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 HMX1Q9NP08 348 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 TMEM248Q9NWD8 314 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 CCNB2O95067 398 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 PSKH1P11801 424 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 PRPS1L1P21108 318 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 MAPK8P45983 427 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 SRSF11Q05519 484 aaKnown RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 PCDH1Q08174 1060 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 ABHD18Q0P651 414 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 ATP13A5Q4VNC0 1218 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 TMEM53Q6P2H8 277 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 ASB18Q6ZVZ8 466 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 CDK20Q8IZL9 346 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 RNF175Q8N4F7 328 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 ZFP90Q8TF47 636 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 HDAC2Q92769 488 aaKnown RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 KCNJ9Q92806 393 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 FUBP3Q96I24 572 aaKnown RBP eCLIP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 NARS2Q96I59 477 aaKnown RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 TEX37Q96LM6 180 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 KIAA1522Q9P206 1035 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-201ENST00000226574 RIMKLBQ9ULI2 386 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 PEX16Q9Y5Y5 336 aa13.38□□□□□ -0.27
NFKB1-201ENST00000226574 TCRBV3S1A0A5B6 114 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 SAGE2PA6NJ88 616 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 ACOX3O15254 700 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 SEPT4O43236 478 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 SSNA1O43805 119 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 SERPINB7O75635 380 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 PRG2P13727 222 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 TMBIM6P55061 237 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 TAS2R41P59536 307 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 MTAPQ13126 283 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 CDC73Q6P1J9 531 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 Q6ZVL8 140 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 LAPTM4BQ86VI4 370 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 MCUBQ9NWR8 336 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 PCTPQ9UKL6 214 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms