RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 PERM1Q5SV97 790 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 ICE2Q659A1 982 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 SPRED1Q7Z699 444 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 L3MBTL4Q8NA19 623 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 ABHD11Q8NFV4 315 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 OR2L3Q8NG85 312 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 OR4K1Q8NGD4 311 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 RHBDD1Q8TEB9 315 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 TRPC4APQ8TEL6 797 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 AGAP11Q8TF27 550 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 NEIL2Q969S2 332 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 CCDC74AQ96AQ1 378 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 C7orf26Q96N11 449 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 ZNF317Q96PQ6 595 aaPredicted RBP13.54□□□□□ -0.24
SEC61B-201ENST00000223641 EHD1Q9H4M9 534 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 SEMA4BQ9NPR2 832 aaPredicted RBP13.54□□□□□ -0.24
SEC61B-201ENST00000223641 KCNK4Q9NYG8 393 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 ACTR10Q9NZ32 417 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 TAC3Q9UHF0 121 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 SH2B3Q9UQQ2 575 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 STK38LQ9Y2H1 464 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.54□□□□□ -0.24
SEC61B-201ENST00000223641 HEATR5BQ9P2D3 2071 aa13.54□□□□□ -0.24
SEC61B-201ENST00000223641 ZNF292O60281 2723 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 IGKV1-8A0A0C4DH67 115 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 C4orf47A7E2U8 309 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 ISM1B1AKI9 464 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 SH3BP5O60239 455 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 GDF9O60383 454 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 LYPLA1O75608 230 aaPredicted RBP13.53□□□□□ -0.24
SEC61B-201ENST00000223641 ESRRBO95718 433 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 LDOC1O95751 146 aaPredicted RBP13.53□□□□□ -0.24
SEC61B-201ENST00000223641 OTCP00480 354 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 EBLN1P0CF75 366 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 UGT2B7P16662 529 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 TYRP1P17643 537 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 AMD1P17707 334 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 TSPAN8P19075 237 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 ACP1P24666 158 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 CD1CP29017 333 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 ALDH4A1P30038 563 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 LSP1P33241 339 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 LIMK1P53667 647 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 PKNOX1P55347 436 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 OR1D5P58170 312 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 ERVPABLB-1P60509 514 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 ABATP80404 500 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 CFHR1Q03591 330 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 SLC5A12Q1EHB4 618 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 GGTA1PQ4G0N0 100 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 THEMIS2Q5TEJ8 643 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 LIPJQ5W064 366 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 ATG9BQ674R7 924 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 TTC19Q6DKK2 380 aaPredicted RBP13.53□□□□□ -0.24
SEC61B-201ENST00000223641 SLCO4C1Q6ZQN7 724 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 PIP4P1Q86T03 277 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 C17orf64Q86WR6 236 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 FAM129CQ86XR2 697 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 NAXDQ8IW45 347 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 SLC5A11Q8WWX8 675 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 GRAMD1AQ96CP6 724 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 CNDP2Q96KP4 475 aaKnown RBP13.53□□□□□ -0.24
SEC61B-201ENST00000223641 ACAT2Q9BWD1 397 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 ABCG4Q9H172 646 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 EML4Q9HC35 981 aaKnown RBP13.53□□□□□ -0.24
SEC61B-201ENST00000223641 TNFRSF12AQ9NP84 129 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 SLCO1B3Q9NPD5 702 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 EVA1BQ9NVM1 165 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 POMT2Q9UKY4 750 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 RAP2CQ9Y3L5 183 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 DYRK1BQ9Y463 629 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 ANGPTL3Q9Y5C1 460 aa13.53□□□□□ -0.24
SEC61B-201ENST00000223641 CPED1A4D0V7 1026 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 TCP11X1B4DZS4 312 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 E7EQ34 232 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 CLGNO14967 610 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 ZW10O43264 779 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 TNFSF14O43557 240 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 EDF1O60869 148 aaKnown RBP13.52□□□□□ -0.25
SEC61B-201ENST00000223641 SHOX2O60902 331 aaPredicted RBP13.52□□□□□ -0.25
SEC61B-201ENST00000223641 CCNDBP1O95273 360 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 C9P02748 559 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 GP1BAP07359 652 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 C1GALT1C1LP0DN25 315 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 CD22P20273 847 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 HRH2P25021 359 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 CCNG1P51959 295 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 PRKAA1Q13131 559 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 CHIT1Q13231 466 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 TSTA3Q13630 321 aaPredicted RBP13.52□□□□□ -0.25
SEC61B-201ENST00000223641 SF1Q15637 639 aaKnown RBP13.52□□□□□ -0.25
SEC61B-201ENST00000223641 CATSPEREQ5SY80 951 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 STPG1Q5TH74 334 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 KIAA1614Q5VZ46 1190 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 ZNF425Q6IV72 752 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 LETMD1Q6P1Q0 360 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 WDR74Q6RFH5 385 aaPredicted RBP13.52□□□□□ -0.25
SEC61B-201ENST00000223641 SPESP1Q6UW49 350 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 NXPE4Q6UWF7 544 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 EFL1Q7Z2Z2 1120 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms