RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 DCUN1D3Q8IWE4 304 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 PSMA8Q8TAA3 256 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 CEP295NLQ96MC4 621 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 LDAHQ9H6V9 325 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 LRRC37A3O60309 1634 aa17.99■□□□□ 0.47
CLIP2-201ENST00000223398 A0A075B6Q4 140 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 IGLON5A6NGN9 336 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 ASNA1O43681 348 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 PSIP1O75475 530 aaKnown RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 CAPGP40121 348 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 DGKQP52824 942 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 CLLU1OSQ5K130 101 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 TMIGD1Q6UXZ0 262 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 GJD3Q8N144 294 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 OR2M4Q96R27 311 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 CLK4Q9HAZ1 481 aaKnown RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 CCNB1IP1Q9NPC3 277 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 PTGESO14684 152 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 CBSLP0DN79 551 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 CBSP35520 551 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 DEFB103AP81534 67 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 OR9A1PQ8NGU1 263 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 OR6K6Q8NGW6 343 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 HM13Q8TCT9 377 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 DCAKDQ8WVC6 231 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 EFHD2Q96C19 240 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 C1orf74Q96LT6 269 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 HERC2P3Q9BVR0 1158 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 SPATA9Q9BWV2 254 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 SSU72Q9NP77 194 aaKnown RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 GPR34Q9UPC5 381 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 RNF11Q9Y3C5 154 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 NRXN3Q9Y4C0 1643 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 FAM234BA2RU67 622 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 H7BY64 318 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 OAS1P00973 400 aaKnown RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 GLDCP23378 1020 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 MZT2BQ6NZ67 158 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 CILP2Q8IUL8 1156 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 DDX1Q92499 740 aaKnown RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 PRAP1Q96NZ9 151 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 TUBGCP5Q96RT8 1024 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 GAL3ST1Q99999 423 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 AKTIPQ9H8T0 292 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 GNEQ9Y223 722 aaKnown RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 BTBD3Q9Y2F9 522 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 PCDHB3Q9Y5E6 796 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 DUXAA6NLW8 204 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 CHRM5P08912 532 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 PRPS1L1P21108 318 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 VSX2P58304 361 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 ENPP2Q13822 863 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 CAMK1Q14012 370 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 SMYD5Q6GMV2 418 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 AHSA2Q719I0 299 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 TRPV3Q8NET8 790 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 OR4K17Q8NGC6 315 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 ZNF641Q96N77 438 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 PLEKHG4BQ96PX9 1271 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 GPATCH1Q9BRR8 931 aaKnown RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 TAB1Q15750 504 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 PERM1Q5SV97 790 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 C6orf52Q5T4I8 152 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 TMEM214Q6NUQ4 689 aaKnown RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 APCDD1Q8J025 514 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 CBR4Q8N4T8 237 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 TSACCQ96A04 125 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 NLE1Q9NVX2 485 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-201ENST00000223398 TVP23BQ9NYZ1 205 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 FZD4Q9ULV1 537 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 WASF2Q9Y6W5 498 aa17.98■□□□□ 0.47
CLIP2-201ENST00000223398 MYH2Q9UKX2 1941 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 MAN2B1O00754 1011 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 MTHFD1P11586 935 aaKnown RBP17.97■□□□□ 0.47
CLIP2-201ENST00000223398 SPIN4Q56A73 249 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 OR10H4Q8NGA5 316 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 OR2AJ1Q8NGZ0 328 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 FAM83CQ9BQN1 747 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 OR8D2Q9GZM6 311 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 KCNH6Q9H252 994 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 MKKSQ9NPJ1 570 aaPredicted RBP17.97■□□□□ 0.47
CLIP2-201ENST00000223398 TSPAN6O43657 245 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 NOBOXO60393 691 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 THRBP10828 461 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 SLC26A3P40879 764 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 MNDAP41218 407 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 ZNF311Q5JNZ3 666 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 ROPN1LQ96C74 230 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 IRGMA1A4Y4 181 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 FAM25EA8MYX2 175 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 JUNDP17535 347 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 TLR1Q15399 786 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 TMEM25Q86YD3 366 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 KIAA1143Q96AT1 154 aaPredicted RBP17.97■□□□□ 0.47
CLIP2-201ENST00000223398 MMABQ96EY8 250 aaPredicted RBP17.97■□□□□ 0.47
CLIP2-201ENST00000223398 WDR92Q96MX6 357 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 METTL7AQ9H8H3 244 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 SERINC1Q9NRX5 453 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 RBM47A0AV96 593 aaKnown RBP17.97■□□□□ 0.47
CLIP2-201ENST00000223398 BTN3A3O00478 584 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms