RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 TRAF3Q13114 568 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 SLBPQ14493 270 aaKnown RBP eCLIP13.21□□□□□ -0.29
RAB3D-201ENST00000222120 MYBPC3Q14896 1274 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 UGT3A2Q3SY77 523 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 EGFLAMQ63HQ2 1017 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 CXorf57Q6NSI4 855 aaKnown RBP13.21□□□□□ -0.29
RAB3D-201ENST00000222120 MED27Q6P2C8 311 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 PGBD3Q8N328 593 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 XAGE5Q8WWM1 108 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 ABHD8Q96I13 439 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 KCNC2Q96PR1 638 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 ANKRD60Q9BZ19 345 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 TDP1Q9NUW8 608 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 CD300AQ9UGN4 299 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 DLGAP4Q9Y2H0 992 aa13.21□□□□□ -0.29
RAB3D-201ENST00000222120 NDUFS2O75306 463 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 KRT75O95678 551 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 POLR2IP36954 125 aaKnown RBP13.21□□□□□ -0.3
RAB3D-201ENST00000222120 SEPHS1P49903 392 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 UAP1L1Q3KQV9 507 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 DGKKQ5KSL6 1271 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 IER5LQ5T953 404 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 SLC8B1Q6J4K2 584 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 CHPFQ8IZ52 775 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 OR8H2Q8N162 312 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 FOXJ1Q92949 421 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 BORCS5Q969J3 196 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 NACC2Q96BF6 587 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 PYURFQ96I23 114 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 TPK1Q9H3S4 243 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 LHX3Q9UBR4 397 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 PLAGL1Q9UM63 463 aa13.21□□□□□ -0.3
RAB3D-201ENST00000222120 RGS10O43665 173 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 OR10H3O60404 316 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 SRCP12931 536 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 DGKGP49619 791 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 DEFB103AP81534 67 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 HSPB3Q12988 150 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 PON2Q15165 354 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 OR2T5Q6IEZ7 315 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 PHYKPLQ8IUZ5 450 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 OR2T29Q8NH02 315 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 NETO1Q8TDF5 533 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 STON2Q8WXE9 905 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 STARD8Q92502 1023 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 SLCO4A1Q96BD0 722 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 GPRC5BQ9NZH0 403 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 DEC1Q9P2X7 70 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 CLEC4EQ9ULY5 219 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 EPHX1P07099 455 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 TUBA4AP68366 448 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 CAP1Q01518 475 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 SRSF11Q05519 484 aaKnown RBP13.2□□□□□ -0.3
RAB3D-201ENST00000222120 NPTX1Q15818 432 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 GRASPQ7Z6J2 395 aaPredicted RBP13.2□□□□□ -0.3
RAB3D-201ENST00000222120 TIFAQ96CG3 184 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 OLAHQ9NV23 265 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 BACE2Q9Y5Z0 518 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 TTC34A8MYJ7 566 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 FAM220BPB1ANY3 271 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 KPNA4O00629 521 aaPredicted RBP13.2□□□□□ -0.3
RAB3D-201ENST00000222120 TGM5O43548 720 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 TACR1P25103 407 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 PLA2G16P53816 162 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 RPS13P62277 151 aaKnown RBP13.2□□□□□ -0.3
RAB3D-201ENST00000222120 TYW3Q6IPR3 259 aaKnown RBP13.2□□□□□ -0.3
RAB3D-201ENST00000222120 TRIM40Q6P9F5 258 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 SVOPLQ8N434 492 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 MAL2Q969L2 176 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 NAA50Q9GZZ1 169 aaKnown RBP13.2□□□□□ -0.3
RAB3D-201ENST00000222120 ITM2BQ9Y287 266 aa13.2□□□□□ -0.3
RAB3D-201ENST00000222120 VILLO15195 856 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 KRT8P05787 483 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 SMIM18P0DKX4 95 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 CCR7P32248 378 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 GRK3P35626 688 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 TXNL4AP83876 142 aaKnown RBP13.19□□□□□ -0.3
RAB3D-201ENST00000222120 ANXA8L1Q5VT79 327 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 HSH2DQ96JZ2 352 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 ZFYVE19Q96K21 471 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 EPS8L2Q9H6S3 715 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 CNOT11Q9UKZ1 510 aaKnown RBP13.19□□□□□ -0.3
RAB3D-201ENST00000222120 LSM1O15116 133 aaKnown RBP13.19□□□□□ -0.3
RAB3D-201ENST00000222120 SOCS5O75159 536 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 UGT2B11O75310 529 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 KLK1P06870 262 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 PTPN2P17706 415 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 DMPKQ09013 629 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 ABHD18Q0P651 414 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 PCBP2Q15366 365 aaKnown RBP eCLIP13.19□□□□□ -0.3
RAB3D-201ENST00000222120 HEATR4Q86WZ0 1026 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 OVCA2Q8WZ82 227 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 MCMBPQ9BTE3 642 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 SEZ6LQ9BYH1 1024 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 DUS2Q9NX74 493 aaKnown RBP13.19□□□□□ -0.3
RAB3D-201ENST00000222120 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.19□□□□□ -0.3
RAB3D-201ENST00000222120 BOLA2-SMG1P6H3BVE0 249 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 M0QX08 132 aa13.19□□□□□ -0.3
RAB3D-201ENST00000222120 PLK4O00444 970 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms