RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 GRIA4P48058 902 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 GPR15P49685 360 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 POU4F3Q15319 338 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 GLB1LQ6UWU2 654 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 ZNF782Q6ZMW2 699 aaPredicted RBP13.27□□□□□ -0.28
GABPB1-201ENST00000220429 ZNF680Q8NEM1 530 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 SLC30A3Q99726 388 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 ABT1Q9ULW3 272 aaKnown RBP13.27□□□□□ -0.28
GABPB1-201ENST00000220429 HS3ST4Q9Y661 456 aa13.27□□□□□ -0.28
GABPB1-201ENST00000220429 SDHDO14521 159 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 TCF3P15923 654 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 TGFBR2P37173 567 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 ACLYP53396 1101 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 IRF9Q00978 393 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 IRF3Q14653 427 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 GPR68Q15743 365 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 CLEC14AQ86T13 490 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 STK32CQ86UX6 486 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 ATAD1Q8NBU5 361 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 SMG7Q92540 1137 aaKnown RBP13.27□□□□□ -0.29
GABPB1-201ENST00000220429 ROPN1LQ96C74 230 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 FCRL5Q96RD9 977 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 TBL1YQ9BQ87 522 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 GLOD4Q9HC38 313 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 HPF1Q9NWY4 346 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 MPP6Q9NZW5 540 aa13.27□□□□□ -0.29
GABPB1-201ENST00000220429 AGO1Q9UL18 857 aaKnown RBP13.27□□□□□ -0.29
GABPB1-201ENST00000220429 MTF2Q9Y483 593 aaPredicted RBP13.27□□□□□ -0.29
GABPB1-201ENST00000220429 E9PAM4 449 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 SYN3O14994 580 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 MUSKO15146 869 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 MATN3O15232 486 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 OAZ2O95190 189 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 RPS17P08708 135 aaKnown RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 HLA-DMAP28067 261 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 ISL1P61371 349 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 KIF19Q2TAC6 998 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 PYCR3Q53H96 274 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 LRFN4Q6PJG9 635 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 PAMR1Q6UXH9 720 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 CCDC190Q86UF4 302 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 VPS39Q96JC1 886 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 RPL10LQ96L21 214 aaKnown RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 RDH12Q96NR8 316 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 FEM1AQ9BSK4 669 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 TRAPPC4Q9Y296 219 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 PRG3Q9Y2Y8 225 aaPredicted RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 AAR2Q9Y312 384 aaKnown RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 A0A096LPK6 155 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 NUPL2O15504 423 aaKnown RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 PSMD3O43242 534 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 AIREO43918 545 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 EOMESO95936 686 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 AHSGP02765 367 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 DNTTP04053 509 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 HLA-DQB2P05538 268 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 PIGAP37287 484 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 OR1G1P47890 313 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 MASP1P48740 699 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 GRK1Q15835 563 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 NOMO2Q5JPE7 1267 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 AFMIDQ63HM1 303 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 SLC24A5Q71RS6 500 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 C11orf96Q7Z7L8 435 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 IPMKQ8NFU5 416 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 SLC9A6Q92581 669 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 SLC47A1Q96FL8 570 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 TRMT61AQ96FX7 289 aaKnown RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 FRMD6Q96NE9 622 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 BCL2L14Q9BZR8 327 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 AMBRA1Q9C0C7 1298 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 RANBP3Q9H6Z4 567 aaPredicted RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 SDHAF3Q9NRP4 125 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 ABCD2Q9UBJ2 740 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 ACAD8Q9UKU7 415 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 RAB23Q9ULC3 237 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 MAGED1Q9Y5V3 778 aaPredicted RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 OR6C65A6NJZ3 312 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 MPOP05164 745 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 SRCP12931 536 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 SELLP14151 372 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 GRK4P32298 578 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 GRIK2Q13002 908 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 TAB1Q15750 504 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 ZNF124Q15973 351 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 FCRLBQ6BAA4 426 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 TFAP2EQ6VUC0 442 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 RNF180Q86T96 592 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 TMC8Q8IU68 726 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 RTL3Q8N8U3 475 aaKnown RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 OR7G3Q8NG95 312 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 ATOH1Q92858 354 aaPredicted RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 RBPMSQ93062 196 aaKnown RBP13.26□□□□□ -0.29
GABPB1-201ENST00000220429 LRCH3Q96II8 777 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 SERPINB11Q96P15 392 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 MBOAT4Q96T53 435 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 SEPHS2Q99611 448 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 FICDQ9BVA6 458 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 IL1RL2Q9HB29 575 aa13.26□□□□□ -0.29
GABPB1-201ENST00000220429 ACSL5Q9ULC5 683 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms