RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 SLC6A13Q9NSD5 602 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 PKD2L2Q9NZM6 624 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 VAPAQ9P0L0 249 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 LAMA1P25391 3075 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 TBC1D3BA6NDS4 549 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 PRAMEF4O60810 478 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 IST1P53990 364 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 PTPN5P54829 565 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 POLR2LP62875 67 aaKnown RBP9.69□□□□□ -0.86
USP11-201ENST00000218348 MEF2AQ02078 507 aaPredicted RBP9.69□□□□□ -0.86
USP11-201ENST00000218348 CHIT1Q13231 466 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 STARD3Q14849 445 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 PCBP2Q15366 365 aaKnown RBP eCLIP9.69□□□□□ -0.864e-7■■□□□ 14
USP11-201ENST00000218348 ZNF77Q15935 545 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 ZNF284Q2VY69 593 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 PRAMEF9Q5VWM5 478 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 FAM180BQ6P0A1 224 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 ZFP1Q6P2D0 407 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 PARS2Q7L3T8 475 aaKnown RBP9.69□□□□□ -0.86
USP11-201ENST00000218348 SPATA19Q7Z5L4 167 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 ADGRG6Q86SQ4 1221 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 MYOCQ99972 504 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 CAAP1Q9H8G2 361 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 LRTM1Q9HBL6 345 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 HPS4Q9NQG7 708 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 IL36AQ9UHA7 158 aa9.69□□□□□ -0.86
USP11-201ENST00000218348 LEF1Q9UJU2 399 aaPredicted RBP9.69□□□□□ -0.86
USP11-201ENST00000218348 TRBV5-4A0A0C4DH59 114 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 MANBAO00462 879 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 GNAO1P09471 354 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 ADH5P11766 374 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 CLK3P49761 638 aaKnown RBP9.68□□□□□ -0.86
USP11-201ENST00000218348 RPL26P61254 145 aaKnown RBP9.68□□□□□ -0.86
USP11-201ENST00000218348 SIGIRRQ6IA17 410 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 SULT1C3Q6IMI6 304 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 CFAP206Q8IYR0 622 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 OFCC1Q8IZS5 231 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 PDPRQ8NCN5 879 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 CYGBQ8WWM9 190 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 NCLNQ969V3 563 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 ECHDC3Q96DC8 303 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 APIPQ96GX9 242 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 NUSAP1Q9BXS6 441 aaKnown RBP9.68□□□□□ -0.86
USP11-201ENST00000218348 TRIM54Q9BYV2 358 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 GRIP2Q9C0E4 1043 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 OR2AG1Q9H205 316 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 UTS2RQ9UKP6 389 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 PLAGL1Q9UM63 463 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 OAZ3Q9UMX2 235 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 A0A0C4DFX4 3053 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 LZTS3O60299 673 aaPredicted RBP9.68□□□□□ -0.86
USP11-201ENST00000218348 CLDN9O95484 217 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 TCF3P15923 654 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 AOAHP28039 575 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 GNPDA1P46926 289 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 PCYT1AP49585 367 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 CDH15P55291 814 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 MAPKAPK3Q16644 382 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 FAM86B1Q8N7N1 296 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 RASGEF1AQ8N9B8 481 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 ROPN1LQ96C74 230 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 MRGPRX3Q96LB0 322 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 OR52E6Q96RD3 313 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 GPATCH1Q9BRR8 931 aaKnown RBP9.68□□□□□ -0.86
USP11-201ENST00000218348 ACPTQ9BZG2 426 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 RPF2Q9H7B2 306 aaKnown RBP9.68□□□□□ -0.86
USP11-201ENST00000218348 SFXN1Q9H9B4 322 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 DZANK1Q9NVP4 752 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 SLC8A2Q9UPR5 921 aa9.68□□□□□ -0.86
USP11-201ENST00000218348 EIF3LQ9Y262 564 aaKnown RBP9.68□□□□□ -0.86
USP11-201ENST00000218348 SOBPA7XYQ1 873 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 IFRD1O00458 451 aaPredicted RBP9.67□□□□□ -0.86
USP11-201ENST00000218348 RGS14O43566 566 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 EPORP19235 508 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 PSMA4P25789 261 aaKnown RBP9.67□□□□□ -0.86
USP11-201ENST00000218348 MAP4P27816 1152 aaKnown RBP9.67□□□□□ -0.86
USP11-201ENST00000218348 IRF8Q02556 426 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 XKR6Q5GH73 641 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 RAET1GQ6H3X3 334 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 GLYATQ6IB77 296 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 CHCHD4Q8N4Q1 142 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 FRS2Q8WU20 508 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 TMEM159Q96B96 161 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 HOPXQ9BPY8 73 aaPredicted RBP9.67□□□□□ -0.86
USP11-201ENST00000218348 EFHD1Q9BUP0 239 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 SLC52A3Q9NQ40 469 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 FAM234BA2RU67 622 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 CFAP99D6REC4 459 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 GSTA4O15217 222 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 LATO43561 262 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 VPS4BO75351 444 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 RPS3P23396 243 aaKnown RBP eCLIP9.67□□□□□ -0.866e-7■■■□□ 18.8
USP11-201ENST00000218348 SLC7A1P30825 629 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 VIPR1P32241 457 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 CHN2P52757 468 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 PRKCQQ04759 706 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 TMEM259Q4ZIN3 620 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 PYCR3Q53H96 274 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 FAM78AQ5JUQ0 283 aa9.67□□□□□ -0.86
USP11-201ENST00000218348 C6orf132Q5T0Z8 1188 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms