RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ZER1Q7Z7L7 766 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SPARTQ8N0X7 666 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 GPC2Q8N158 579 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 RPLP0P6Q8NHW5 317 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SLC13A3Q8WWT9 602 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 FCAMRQ8WWV6 532 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 TMEM209Q96SK2 561 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ASPNQ9BXN1 380 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 OR10A4Q9H209 315 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 FBRSQ9HAH7 460 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ZNHIT2Q9UHR6 403 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF175Q9Y473 711 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 MEGF11A6BM72 1044 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 EFCAB7A8K855 629 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 GLP1RP43220 463 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 CA9Q16790 459 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 KIAA1614Q5VZ46 1190 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 PACS2Q86VP3 889 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ZDHHC14Q8IZN3 488 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 OR2L8Q8NGY9 312 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 CIB1Q99828 191 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SEMA3CQ99985 751 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 BCL9LQ86UU0 1499 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SLITRK3O94933 977 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 APBB3O95704 486 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 JUNDP17535 347 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 NCS1P62166 190 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 RSU1Q15404 277 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 GPRC6AQ5T6X5 926 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 RELL1Q8IUW5 271 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 UBQLNLQ8IYU4 475 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ITPAQ9BY32 194 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 POLR2J3Q9H1A7 115 aaKnown RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 PTGES2Q9H7Z7 377 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 GPN2Q9H9Y4 310 aaPredicted RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 TNFRSF10DQ9UBN6 386 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SPEF1Q9Y4P9 236 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 A0A1W2PPW3 197 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 KDM4BO94953 1096 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 CXCL8P10145 99 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 DGKGP49619 791 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 CARD16Q5EG05 197 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 OR8J3Q8NGG0 315 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 GRIN3AQ8TCU5 1115 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 SENP8Q96LD8 212 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 HYLS1Q96M11 299 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 COL21A1Q96P44 957 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 ACTL8Q9H568 366 aa5.95□□□□□ -1.46
VPS13D-201ENST00000011700 AGO3Q9H9G7 860 aaKnown RBP5.95□□□□□ -1.46
VPS13D-201ENST00000011700 RBBP6Q7Z6E9 1792 aaKnown RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 PGLSO95336 258 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 APODP05090 189 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ALPPP05187 535 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 XKP51811 444 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 PTPN20Q4JDL3 420 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 OR5J2Q8NH18 312 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 NTAN1Q96AB6 310 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SYT3Q9BQG1 590 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CHMP1AQ9HD42 196 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 UCKL1Q9NWZ5 548 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ATRNL1Q5VV63 1379 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 PHIPQ8WWQ0 1821 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TMEM150CB9EJG8 249 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CASP6P55212 293 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ENPP2Q13822 863 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 NFIXQ14938 502 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 POU5F2Q8N7G0 328 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 FBXO22Q8NEZ5 403 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TWIST2Q8WVJ9 160 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 COPS5Q92905 334 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF285Q96NJ3 590 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TTPALQ9BTX7 342 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ZDHHC6Q9H6R6 413 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SLC7A8Q9UHI5 535 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 PADI2Q9Y2J8 665 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 DAPL1A0PJW8 107 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF726A6NNF4 738 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 FTCDNL1E5RQL4 147 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CCINQ13939 588 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SF1Q15637 639 aaKnown RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 HAGHLQ6PII5 290 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 KCNK18Q7Z418 384 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ATP6V1C2Q8NEY4 427 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 KXD1Q9BQD3 176 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ACBD6Q9BR61 282 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 IKZF2Q9UKS7 526 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ACSL5Q9ULC5 683 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ARFGEF3Q5TH69 2177 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 H7C417 338 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 MAD2L1BPQ15013 274 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 PGBD2Q6P3X8 592 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 IFNLR1Q8IU57 520 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SLC43A3Q8NBI5 491 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TERB2Q8NHR7 220 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TRUB1Q8WWH5 349 aaKnown RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 GATAD2BQ8WXI9 593 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 FEM1CQ96JP0 617 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 HS6ST2Q96MM7 605 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CAPN10Q9HC96 672 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TOR4AQ9NXH8 423 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms