RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 COCHO43405 550 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 CLDN11O75508 207 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 DNAJB5O75953 348 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 CLDN9O95484 217 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 DGKAP23743 735 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 GADD45AP24522 165 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 NR4A2P43354 598 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 ARHGDIAP52565 204 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 CRISP3P54108 245 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 LRIF1Q5T3J3 769 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 ZNF513Q8N8E2 541 aaPredicted RBP13.64□□□□□ -0.23
USH1C-201ENST00000005226 POC5Q8NA72 575 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 OR52E4Q8NGH9 312 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 USP7Q93009 1102 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 HSH2DQ96JZ2 352 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 APOL4Q9BPW4 351 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 RNF38Q9H0F5 515 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 QPCTLQ9NXS2 382 aa13.64□□□□□ -0.23
USH1C-201ENST00000005226 NDRG4Q9ULP0 352 aaKnown RBP13.64□□□□□ -0.23
USH1C-201ENST00000005226 LOC100506127A0A0U1RQW1 187 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 OR2A25A4D2G3 310 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 CLIC1O00299 241 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 WNT9AO14904 365 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 YY2O15391 372 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 SMAD6O43541 496 aaKnown RBP13.63□□□□□ -0.23
USH1C-201ENST00000005226 CELF2O95319 508 aaKnown RBP13.63□□□□□ -0.23
USH1C-201ENST00000005226 DLGAP3O95886 979 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 ALOX5P09917 674 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 EBLN1P0CF75 366 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 TNFRSF1BP20333 461 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 HMGCLP35914 325 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 MAGEA2P43356 314 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 ABHD18Q0P651 414 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 C5orf22Q49AR2 442 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 GPRC6AQ5T6X5 926 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 RFLNAQ6ZTI6 216 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 TMEM173Q86WV6 379 aaPredicted RBP13.63□□□□□ -0.23
USH1C-201ENST00000005226 ARMC8Q8IUR7 673 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 LYSMD2Q8IV50 215 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 TM9SF3Q9HD45 589 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 TMEM184CQ9NVA4 438 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 ARL15Q9NXU5 204 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 OSGIN1Q9UJX0 560 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 PCDHB1Q9Y5F3 818 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 LAMA2P24043 3122 aaKnown RBP13.63□□□□□ -0.23
USH1C-201ENST00000005226 M0R082 166 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 PSMD11O00231 422 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 PRAMEF4O60810 478 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 KCNK2O95069 426 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 CCNDBP1O95273 360 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 KCNK5O95279 499 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 FABP3P05413 133 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 ZDHHC11BP0C7U3 371 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 HOXB9P17482 250 aaPredicted RBP13.63□□□□□ -0.23
USH1C-201ENST00000005226 ITPKAP23677 461 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 SERPINB1P30740 379 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 DNAJA1P31689 397 aaKnown RBP13.63□□□□□ -0.23
USH1C-201ENST00000005226 EIF2DP41214 584 aaKnown RBP13.63□□□□□ -0.23
USH1C-201ENST00000005226 SLC19A1P41440 591 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 PPP5CP53041 499 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 CYP4F2P78329 520 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 NFATC2Q13469 925 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 MBTPS1Q14703 1052 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 PRAMEF9Q5VWM5 478 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 STEAP3Q658P3 488 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 SPATC1Q76KD6 591 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 TSPAN33Q86UF1 283 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 SYTL1Q8IYJ3 562 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 ENTHD1Q8IYW4 607 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 CLIP4Q8N3C7 705 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 MAL2Q969L2 176 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 PANX1Q96RD7 426 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 NTMT1Q9BV86 223 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 REXO4Q9GZR2 422 aaKnown RBP13.63□□□□□ -0.23
USH1C-201ENST00000005226 ELOVL6Q9H5J4 265 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 THUMPD1Q9NXG2 353 aaKnown RBP13.63□□□□□ -0.23
USH1C-201ENST00000005226 CRLS1Q9UJA2 301 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 CHD5Q8TDI0 1954 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 FPGTO14772 594 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 AIREO43918 545 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 STC2O76061 302 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 KDELR2P33947 212 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 RPIAP49247 311 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 KIAA1614Q5VZ46 1190 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 RBFAQ8N0V3 343 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 BEND7Q8N7W2 519 aaPredicted RBP13.63□□□□□ -0.23
USH1C-201ENST00000005226 WFDC5Q8TCV5 224 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 PIH1D2Q8WWB5 315 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 STARD8Q92502 1023 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 MARCH7Q9H992 704 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 FAM8A1Q9UBU6 413 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 TRPS1Q9UHF7 1281 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 SAMD4AQ9UPU9 718 aaKnown RBP13.63□□□□□ -0.23
USH1C-201ENST00000005226 ATP11BQ9Y2G3 1177 aa13.63□□□□□ -0.23
USH1C-201ENST00000005226 A6NL46 340 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 KRT6AP02538 564 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 KRT6BP04259 564 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 BPIP17213 487 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 FPR1P21462 350 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 KRT6CP48668 564 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms