RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Sim1Q61045 765 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Sema4aQ62178 760 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Irf4Q64287 450 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Map3k10Q66L42 940 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Ptx4Q6RUU0 478 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Pcdh20Q8BIZ0 952 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 CenpiQ8K1K4 746 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Actr8Q8R2S9 624 aaKnown RBP15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Arhgef3Q91X46 524 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 4930519G04RikQ9CPT7 205 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Klhl35Q9CZ49 574 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Hm13Q9D8V0 378 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 IcmtQ9EQK7 283 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gtf2h2Q9JIB4 396 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Slc5a3Q9JKZ2 718 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Arl10Q9QXJ4 243 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Skint8A7XV07 398 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rnf165E9QAU8 347 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Lhx8O35652 367 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 JunbP09450 344 aaKnown RBP15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Zic1P46684 447 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Mrpl10Q3TBW2 262 aaKnown RBP15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Axdnd1Q3UZ57 424 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Fzd4Q61088 537 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 MogQ61885 246 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 PianpQ6P1B3 278 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Kxd1Q80XH1 177 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Wbp1lQ8BGW2 348 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Fam110bQ8C739 366 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Pih1d2Q8CHR9 315 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Vmn1r22Q8R2D1 302 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Pcdhgc3Q91XX1 934 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 OptcQ920A0 328 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gstt3Q99L20 241 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Uqcc2Q9CQY6 136 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Abcb9Q9JJ59 762 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Ppp2r3cQ9JK24 453 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Scamp4Q9JKV5 230 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Unc80Q8BLN6 3261 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Mup6A2AV72 179 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Kcnk1O08581 336 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 PthlhP22858 175 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Txnl4aP83877 142 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Nudt18Q3U2V3 323 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Fgfr3Q61851 801 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Zswim9Q6DI92 447 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Pfkfb4Q6DTY7 469 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Prdm8Q8BZ97 687 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Kctd11Q8K485 232 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Vmn1r87Q8R255 295 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rab30Q923S9 203 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Mrpl14Q9D1I6 145 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Herpud2Q9JJC9 404 aa15.43■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cyp8b1O88962 500 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 P06324 132 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 TfamP40630 243 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Sox9Q04887 507 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Dnajc11Q5U458 559 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Olfr1322Q7TQW3 310 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Fads6Q80UG1 342 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Tmem252Q8C353 183 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rcor1Q8CFE3 480 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rnf219Q8K2Y0 722 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Slc5a9Q8VDT1 685 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 DynapQ9D7M5 161 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Anapc1P53995 1944 aaKnown RBP15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gm21885A0A286YDN8 145 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Zbtb34A2ATY4 518 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Dlgap4B1AZP2 992 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Olfr891E9Q843 316 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 IghgP01863 330 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cdh5P55284 784 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Krt2Q3TTY5 707 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Wipi2Q80W47 445 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Coq6Q8R1S0 476 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Dpy30Q99LT0 99 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Trappc5Q9CQA1 188 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Snap29Q9ERB0 260 aa15.42■□□□□ 0.06
Trim39-203ENSMUST00000113706 Obox5G3X9P6 291 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Wdr36Q3TAQ9 899 aaKnown RBP15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Cyb5r4Q3TDX8 528 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gm4981Q3ULJ8 291 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gm11992Q5SS90 291 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Tas2r131Q7M708 310 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Ahcyl1Q80SW1 530 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Znf32Q80V23 272 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Agfg1Q8K2K6 561 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Akr1c20Q8VC77 323 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 PxnQ8VI36 591 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 DgkgQ91WG7 788 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Ptgr1Q91YR9 329 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Rgs18Q99PG4 235 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Nkx2-4Q9EQM3 354 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Olfr1188A2AV10 312 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gm6685D3YYP3 228 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Atp6ap1lD3Z5W0 336 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 RbpjlO08674 515 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Gnpda1O88958 289 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Csf2rbP26955 896 aa15.41■□□□□ 0.06
Trim39-203ENSMUST00000113706 Eva1bQ8K2Y3 164 aa15.41■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms