RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ero1bQ8R2E9 467 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Msi2Q920Q6 346 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr661Q99NH4 319 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ykt6Q9CQW1 198 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pop4Q9CR08 221 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mfsd10Q9D2V8 456 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Vmn1r56Q9EPS9 310 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Kcnh7Q9ER47 1195 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fbxl6Q9QXW0 535 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Khdrbs3Q9R226 346 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Avpr1bQ9WU02 421 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pld1Q9Z280 1074 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Sdccag3A2AIW0 432 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr1006A2ALD2 312 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ccnyl1D3YUJ3 367 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Serpina3iD3Z450 408 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Smpd5D6MZJ6 483 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr1410E9PYK6 323 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gm21973F6WEZ7 68 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 1700014D04RikJ3QMS2 983 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Zfp457L7N1X4 647 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Prl8a2O54832 240 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Eif6O55135 245 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cops4O88544 406 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ccnb2P30276 398 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Bmp8aP34821 399 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Syt4P40749 425 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Sult1e1P49891 295 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Bmp8bP55105 399 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 CstaP56567 97 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cep76Q0VEJ0 659 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Kcnh6Q32ME0 950 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fscn1Q61553 493 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ahcyl2Q68FL4 613 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Egfl8Q6GUQ1 293 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 DraxinQ6PAL1 343 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Trpv1Q704Y3 839 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr392Q7TRX6 312 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Aldh3b1Q80VQ0 468 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Baiap2l2Q80Y61 522 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Xylt1Q811B1 953 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Aoc2Q812C9 757 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc35f1Q8BGK5 408 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Baiap2Q8BKX1 535 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Wdr27Q8C5V5 780 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc24a4Q8CGQ8 622 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pdlim5Q8CI51 591 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mcoln2Q8K595 566 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr801Q8VEU1 318 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr1346Q8VGH6 313 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mto1Q923Z3 669 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rwdd2bQ99M03 290 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Carhsp1Q9CR86 148 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ola1Q9CZ30 396 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 ArskQ9D2L1 553 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 PrameQ9D4Z5 464 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Twsg1Q9EP52 222 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Popdc2Q9ES82 367 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Actr10Q9QZB7 417 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc6a16A0A1L1SR47 742 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 A0A286YCD0 109 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Zfp990B1AVN5 605 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Prr23a2D3YWX5 253 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Btbd16E9Q173 522 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ccdc7bE9Q9Y3 381 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Vmn2r117K7N6V1 857 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Nfatc1O88942 717 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gstm2P15626 218 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc7a2P18581 657 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Brcc3P46737 291 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tm9sf2P58021 662 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Irf3P70671 419 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rpl10lP86048 214 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 AmbpQ07456 349 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 MplQ08351 625 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ncf1Q09014 390 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Prss48Q14B25 312 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fam178bQ24JP3 464 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Dmrtc1bQ2PMX6 267 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Faf2Q3TDN2 445 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Wdr75Q3U821 830 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ttc9Q3V038 219 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Samhd1Q60710 627 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slitrk6Q8C110 840 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Nrip1Q8CBD1 1161 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Katnal1Q8K0T4 488 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Plac9Q8K262 108 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Zfp940Q8R2Q3 566 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 PxnQ8VI36 591 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pycr2Q922Q4 320 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc8b1Q925Q3 585 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 AmnQ99JB7 458 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Lap3Q9CPY7 519 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rgs10Q9CQE5 181 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Teddm3Q9CQH1 294 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 YwhabQ9CQV8 246 aaKnown RBP9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Snrnp48Q9D361 337 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 RhojQ9ER71 214 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Lpar2Q9JL06 348 aa9.5□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Bace2Q9JL18 514 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 53.8 ms