RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 RBM20Q5T481 1227 aaKnown RBP14.45□□□□□ -0.1
PHGDH-231ENST00000641939 FCRL6Q6DN72 434 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 LCN10Q6JVE6 187 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 LRRC8EQ6NSJ5 796 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 TLDC1Q6P9B6 456 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 TRMT10BQ6PF06 316 aaKnown RBP14.45□□□□□ -0.1
PHGDH-231ENST00000641939 PIWIL4Q7Z3Z4 852 aaKnown RBP14.45□□□□□ -0.1
PHGDH-231ENST00000641939 MCATQ8IVS2 390 aaKnown RBP14.45□□□□□ -0.1
PHGDH-231ENST00000641939 SYTL1Q8IYJ3 562 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 FBXO36Q8NEA4 188 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 OR2L3Q8NG85 312 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 OR2A1Q8NGT9 310 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 SMPDL3AQ92484 453 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 SEC14L1Q92503 715 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 RUFY1Q96T51 708 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 PKP4Q99569 1192 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 MIPEPQ99797 713 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 DPH2Q9BQC3 489 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-231ENST00000641939 EURLQ9NYK6 297 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 SLC17A6Q9P2U8 582 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 POLHQ9Y253 713 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 FARSAQ9Y285 508 aaKnown RBP14.45□□□□□ -0.1
PHGDH-231ENST00000641939 KLK4Q9Y5K2 254 aa14.45□□□□□ -0.1
PHGDH-231ENST00000641939 CDC14CA4D256 554 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 TARM1B6A8C7 271 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 ZBTB14O43829 449 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 SLC16A8O95907 504 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 CTSBP07858 339 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 FURINP09958 794 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 RAB40ALP0C0E4 278 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 SFTPCP11686 197 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 AGXTP21549 392 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 GRIA3P42263 894 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 RGS4P49798 205 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 PNLIPRP1P54315 467 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 CDKN2DP55273 166 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 POLE2P56282 527 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 RPS18P62269 152 aaKnown RBP14.44□□□□□ -0.1
PHGDH-231ENST00000641939 COL9A2Q14055 689 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-231ENST00000641939 FASTKD3Q14CZ7 662 aaKnown RBP14.44□□□□□ -0.1
PHGDH-231ENST00000641939 PTCHD3Q3KNS1 767 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 DUPD1Q68J44 220 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 RHBDD2Q6NTF9 364 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 ZNF572Q7Z3I7 529 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-231ENST00000641939 ZBED8Q8IZ13 594 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 ZNF655Q8N720 491 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-231ENST00000641939 EEF1AKMT1Q8WVE0 214 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 APOBEC4Q8WW27 367 aaKnown RBP14.44□□□□□ -0.1
PHGDH-231ENST00000641939 NLNQ9BYT8 704 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 ADNPQ9H2P0 1102 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 GEMIN8Q9NWZ8 242 aaKnown RBP14.44□□□□□ -0.1
PHGDH-231ENST00000641939 CORO1CQ9ULV4 474 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-231ENST00000641939 SRPK3Q9UPE1 567 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 UTP11Q9Y3A2 253 aaKnown RBP14.44□□□□□ -0.1
PHGDH-231ENST00000641939 BAHCC1Q9P281 2608 aa14.44□□□□□ -0.1
PHGDH-231ENST00000641939 GCN1Q92616 2671 aaKnown RBP14.43□□□□□ -0.1
PHGDH-231ENST00000641939 C9J4A7 227 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 SYF2O95926 243 aaKnown RBP14.43□□□□□ -0.1
PHGDH-231ENST00000641939 CAPN1P07384 714 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 CMPK1P30085 196 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 RPA3P35244 121 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-231ENST00000641939 TSTA3Q13630 321 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-231ENST00000641939 NAA25Q14CX7 972 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 UGT8Q16880 541 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 ZNF385CQ66K41 422 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-231ENST00000641939 PAQR3Q6TCH7 311 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 FAM198BQ6UWH4 519 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 SUSD1Q6UWL2 747 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 UBE2R2Q712K3 238 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-231ENST00000641939 SYVN1Q86TM6 617 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 ENDOVQ8N8Q3 282 aaKnown RBP14.43□□□□□ -0.1
PHGDH-231ENST00000641939 GPATCH11Q8N954 259 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 PROKR1Q8TCW9 393 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 ZNF480Q8WV37 535 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 C16orf45Q96MC5 204 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-231ENST00000641939 NDC1Q9BTX1 674 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 ACAT2Q9BWD1 397 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 MOCS1Q9NZB8 636 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 ZFATQ9P243 1243 aa14.43□□□□□ -0.1
PHGDH-231ENST00000641939 E7ENX8 843 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 EIF3HO15372 352 aaKnown RBP eCLIP14.42□□□□□ -0.1
PHGDH-231ENST00000641939 CTSVO60911 334 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 C8GP07360 202 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 TAP2Q03519 686 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 CKAP4Q07065 602 aaKnown RBP14.42□□□□□ -0.1
PHGDH-231ENST00000641939 MGAT5Q09328 741 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 KCNAB2Q13303 367 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 PDAP1Q13442 181 aaKnown RBP14.42□□□□□ -0.1
PHGDH-231ENST00000641939 NCF4Q15080 339 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 TCTE1Q5JU00 501 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 HECTD2Q5U5R9 776 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 C1orf189Q5VU69 101 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 FAM45BPQ6NSW5 357 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 PALM2Q8IXS6 379 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 MYO1HQ8N1T3 1032 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 PPFIBP2Q8ND30 876 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 FAM45AQ8TCE6 357 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 MCOLN3Q8TDD5 553 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 PYROXD1Q8WU10 500 aa14.42□□□□□ -0.1
PHGDH-231ENST00000641939 DLG3Q92796 817 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms