RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 LEMD2Q8NC56 503 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 GLB1L3Q8NCI6 653 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-223ENST00000641597 ZNF555Q8NEP9 628 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 PJA1Q8NG27 643 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 GIPC3Q8TF64 312 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 MRPL17Q9NRX2 175 aaKnown RBP16.35■□□□□ 0.21
PHGDH-223ENST00000641597 DOLKQ9UPQ8 538 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 SH3BP1Q9Y3L3 701 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 AGAP14A8MT82 685 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 SLC1A7O00341 560 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 SCELO95171 688 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 OLFM2O95897 454 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 MAP2K4P45985 399 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 FOXD4Q12950 439 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-223ENST00000641597 TTLL9Q3SXZ7 439 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 GPR33Q49SQ1 333 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 TPGS2Q68CL5 300 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 TPRG1Q6ZUI0 275 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 TMEM25Q86YD3 366 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 KCNH6Q9H252 994 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 RIBC2Q9H4K1 309 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 SUV39H2Q9H5I1 410 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 DNAAF2Q9NVR5 837 aaKnown RBP16.34■□□□□ 0.21
PHGDH-223ENST00000641597 HCFC1R1Q9NWW0 138 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 THG1LQ9NWX6 298 aaKnown RBP16.34■□□□□ 0.21
PHGDH-223ENST00000641597 ZNF106Q9H2Y7 1883 aaKnown RBP16.34■□□□□ 0.21
PHGDH-223ENST00000641597 CPSF4O95639 269 aaKnown RBP16.34■□□□□ 0.21
PHGDH-223ENST00000641597 VLDLRP98155 873 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 IL5RAQ01344 420 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 CHIT1Q13231 466 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 SLC16A12Q6ZSM3 486 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 ZDHHC21Q8IVQ6 265 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 ZCCHC7Q8N3Z6 543 aaKnown RBP16.34■□□□□ 0.21
PHGDH-223ENST00000641597 ZNF366Q8N895 744 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 ASB11Q8WXH4 323 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 PYURFQ96I23 114 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 RBM4BQ9BQ04 359 aaKnown RBP16.34■□□□□ 0.21
PHGDH-223ENST00000641597 RBM4Q9BWF3 364 aaKnown RBP16.34■□□□□ 0.21
PHGDH-223ENST00000641597 RDH14Q9HBH5 336 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 PRM3Q9NNZ6 103 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 PCDH12Q9NPG4 1184 aa16.34■□□□□ 0.21
PHGDH-223ENST00000641597 BOLA2-SMG1P6H3BVE0 249 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 SOCS5O75159 536 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 ETHE1O95571 254 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 GP2P55259 537 aaKnown RBP16.33■□□□□ 0.21
PHGDH-223ENST00000641597 ABRQ12979 859 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 ATP1A4Q13733 1029 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 RAB33AQ14088 237 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 LRIF1Q5T3J3 769 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 TTC23Q5W5X9 447 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 CPZQ66K79 652 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 NOXRED1Q6NXP6 359 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 C22orf39Q6P5X5 142 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 ZNF621Q6ZSS3 439 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 HOMEZQ8IX15 550 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 EID3Q8N140 333 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 ARL10Q8N8L6 244 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 MAL2Q969L2 176 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 FKBP10Q96AY3 582 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 CCDC138Q96M89 665 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 DEFB118Q96PH6 123 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 ERVK-18Q9QC07 812 aa16.33■□□□□ 0.21
PHGDH-223ENST00000641597 A0A096LPI6 279 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 PREPP48147 710 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 UGT8Q16880 541 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 ATG9BQ674R7 924 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 Q6ZVL8 140 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 HSD11B1LQ7Z5J1 315 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 SLC39A11Q8N1S5 342 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 HDAC2Q92769 488 aaKnown RBP16.33■□□□□ 0.2
PHGDH-223ENST00000641597 PANX1Q96RD7 426 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 SLC46A2Q9BY10 475 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 KIAA1522Q9P206 1035 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-223ENST00000641597 ZNF451Q9Y4E5 1061 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 TRIM64BA6NI03 449 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 C16orf96A6NNT2 1141 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 FAM220BPB1ANY3 271 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 BCAS1O75363 584 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-223ENST00000641597 ERN1O75460 977 aaKnown RBP16.33■□□□□ 0.2
PHGDH-223ENST00000641597 HPRP00739 348 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 URODP06132 367 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 RETP07949 1114 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 AMD1P17707 334 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 ENGP17813 658 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 ETV3P41162 512 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 CCR2P41597 374 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 SLC6A12P48065 614 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 DAPP51397 102 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 PFN3P60673 137 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 SKIV2LQ15477 1246 aaKnown RBP16.33■□□□□ 0.2
PHGDH-223ENST00000641597 Q6ZPB1 254 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-223ENST00000641597 ADHFE1Q8IWW8 467 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 TMEM132CQ8N3T6 1108 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 ERLEC1Q96DZ1 483 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 PLEKHA8Q96JA3 519 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 SAMD11Q96NU1 681 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 SLC12A9Q9BXP2 914 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 AASDHPPTQ9NRN7 309 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms