RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 HGFP14210 728 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 RPL10P27635 214 aaKnown RBP12.71□□□□□ -0.37
PHGDH-221ENST00000641573 HMOX2P30519 316 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 TBCCQ15814 346 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 UAP1L1Q3KQV9 507 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 TCHHL1Q5QJ38 904 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-221ENST00000641573 RD3Q7Z3Z2 195 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 TREML1Q86YW5 311 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 DCUN1D3Q8IWE4 304 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 OR13H1Q8NG92 308 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 OR5AR1Q8NGP9 310 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 ZNF480Q8WV37 535 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 SNX19Q92543 992 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 TSACCQ96A04 125 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-221ENST00000641573 RAD51AP1Q96B01 352 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 MED8Q96G25 268 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 PDXPQ96GD0 296 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 NSL1Q96IY1 281 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 C3orf30Q96M34 536 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 CATSPER2Q96P56 530 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 INSM2Q96T92 566 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-221ENST00000641573 DUSP15Q9H1R2 295 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-221ENST00000641573 TRIT1Q9H3H1 467 aaKnown RBP12.71□□□□□ -0.37
PHGDH-221ENST00000641573 ACTR8Q9H981 624 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 PFDN4Q9NQP4 134 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 TRPS1Q9UHF7 1281 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 INVSQ9Y283 1065 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 WDR37Q9Y2I8 494 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 RNF11Q9Y3C5 154 aa12.71□□□□□ -0.37
PHGDH-221ENST00000641573 WDFY3Q8IZQ1 3526 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 ATP6AP2A0A1C7CYW4 349 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 A0A1W2PPC4 97 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 EIF4E1BA6NMX2 242 aaKnown RBP12.7□□□□□ -0.38
PHGDH-221ENST00000641573 VPS4BO75351 444 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 ATP6AP2O75787 350 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 CLDN9O95484 217 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 SRP54P61011 504 aaKnown RBP12.7□□□□□ -0.38
PHGDH-221ENST00000641573 NCALDP61601 193 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 GRB7Q14451 532 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 ALG11Q2TAA5 492 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 TMEM198Q66K66 360 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 SCIMPQ6UWF3 145 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 LARP4Q71RC2 724 aaKnown RBP eCLIP12.7□□□□□ -0.38
PHGDH-221ENST00000641573 SYTL1Q8IYJ3 562 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 CHCHD4Q8N4Q1 142 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 CPSF7Q8N684 471 aaKnown RBP12.7□□□□□ -0.38
PHGDH-221ENST00000641573 DEFB119Q8N690 84 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 PPFIBP2Q8ND30 876 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 DEFB124Q8NES8 71 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 OR5K2Q8NHB8 316 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 PTCD3Q96EY7 689 aaKnown RBP12.7□□□□□ -0.38
PHGDH-221ENST00000641573 C12orf66Q96MD2 445 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 FERD3LQ96RJ6 166 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 ORAI3Q9BRQ5 295 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 SLC29A3Q9BZD2 475 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 PCED1AQ9H1Q7 454 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 ZNF385DQ9H6B1 395 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 AKTIPQ9H8T0 292 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 INTS7Q9NVH2 962 aaKnown RBP12.7□□□□□ -0.38
PHGDH-221ENST00000641573 TDRKHQ9Y2W6 561 aaKnown RBP12.7□□□□□ -0.38
PHGDH-221ENST00000641573 MSRB2Q9Y3D2 182 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 CFAP20Q9Y6A4 193 aaKnown RBP12.7□□□□□ -0.38
PHGDH-221ENST00000641573 CAPN7Q9Y6W3 813 aa12.7□□□□□ -0.38
PHGDH-221ENST00000641573 PLXND1Q9Y4D7 1925 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 PDZK1P1A8MUH7 402 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 METTL12A8MUP2 240 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 UNC5CO95185 931 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 RASGRP1O95267 797 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 THEGLP0DJG4 465 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 HTR6P50406 440 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 PNLIPRP1P54315 467 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 TBPL1P62380 186 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 CTBSQ01459 385 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 ACTN3Q08043 901 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-221ENST00000641573 KLF10Q13118 480 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 PRKG2Q13237 762 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 PTK2BQ14289 1009 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 CLCA4Q14CN2 919 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 GGTA1PQ4G0N0 100 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 XKR7Q5GH72 579 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 CAPN13Q6MZZ7 669 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-221ENST00000641573 DUS1LQ6P1R4 473 aaKnown RBP12.69□□□□□ -0.38
PHGDH-221ENST00000641573 IL27RAQ6UWB1 636 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 CHSY3Q70JA7 882 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 C11orf74Q86VG3 221 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 MYLK4Q86YV6 388 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-221ENST00000641573 HID1Q8IV36 788 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 HOMEZQ8IX15 550 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 TBC1D21Q8IYX1 336 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 SLC22A18ASQ8N1D0 253 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 TUBGCP3Q96CW5 907 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 MARK4Q96L34 752 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 MAGEB10Q96LZ2 347 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-221ENST00000641573 SLC6A18Q96N87 628 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 CCT7Q99832 543 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 PRDM8Q9NQV8 689 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 POLG2Q9UHN1 485 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 TAGLN3Q9UI15 199 aa12.69□□□□□ -0.38
PHGDH-221ENST00000641573 PNMA8BQ9ULN7 279 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-221ENST00000641573 PLAGL1Q9UM63 463 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms