RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CDK15Q96Q40 435 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 LGR4Q9BXB1 951 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 ATG10Q9H0Y0 220 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 MUC13Q9H3R2 512 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 WDR41Q9HAD4 459 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 PELI2Q9HAT8 420 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 SPAG4Q9NPE6 437 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 TRNAU1APQ9NX07 287 aaKnown RBP9.43□□□□□ -0.9
PHGDH-215ENST00000641371 FAM8A1Q9UBU6 413 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 BAIAP2L1Q9UHR4 511 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 CROTQ9UKG9 612 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 NDRG2Q9UN36 371 aaKnown RBP9.43□□□□□ -0.9
PHGDH-215ENST00000641371 G3BP2Q9UN86 482 aaKnown RBP9.43□□□□□ -0.9
PHGDH-215ENST00000641371 RUVBL1Q9Y265 456 aaKnown RBP9.43□□□□□ -0.9
PHGDH-215ENST00000641371 CCL27Q9Y4X3 112 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 OR1A2Q9Y585 309 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 PCM1Q15154 2024 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 A0A088AWK7 358 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 A0A1B0GTL3 188 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 PRR23AA6NEV1 266 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 CCDC154A6NI56 674 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 PRR19A6NJB7 356 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 OR5K4A6NMS3 321 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 E7ENX8 843 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 NARSO43776 548 aaKnown RBP9.42□□□□□ -0.9
PHGDH-215ENST00000641371 EEDO75530 441 aaKnown RBP9.42□□□□□ -0.9
PHGDH-215ENST00000641371 FKBP9O95302 570 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 IL6P05231 212 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 C1GALT1C1LP0DN25 315 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 ITPKAP23677 461 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 CD6P30203 668 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 RPL3P39023 403 aaKnown RBP9.42□□□□□ -0.9
PHGDH-215ENST00000641371 PIK3CBP42338 1070 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 GSTM5P46439 218 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 ASMTP46597 345 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 RAB28P51157 221 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 BLKP51451 505 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 POLR2JP52435 117 aaKnown RBP9.42□□□□□ -0.9
PHGDH-215ENST00000641371 HNRNPFP52597 415 aaKnown RBP9.42□□□□□ -0.9
PHGDH-215ENST00000641371 ACTR3P61158 418 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 ABATP80404 500 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 SLC25A3Q00325 362 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 TAP2Q03519 686 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 GRB7Q14451 532 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 KRT33BQ14525 404 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 CCDC85BQ15834 202 aaPredicted RBP9.42□□□□□ -0.9
PHGDH-215ENST00000641371 UAP1L1Q3KQV9 507 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 SPIN4Q56A73 249 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 C1orf146Q5VVC0 180 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 FBXW10Q5XX13 1052 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 CYP20A1Q6UW02 462 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 ABRAXAS1Q6UWZ7 409 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 GK5Q6ZS86 529 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 CHST15Q7LFX5 561 aaPredicted RBP9.42□□□□□ -0.9
PHGDH-215ENST00000641371 ABI3BPQ7Z7G0 1075 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 C17orf64Q86WR6 236 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 SPNS2Q8IVW8 549 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 MINDY1Q8N5J2 469 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 CAMKK1Q8N5S9 505 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 TBC1D19Q8N5T2 526 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 DPP10Q8N608 796 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 LILRA3Q8N6C8 439 aaPredicted RBP9.42□□□□□ -0.9
PHGDH-215ENST00000641371 TTLQ8NG68 377 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 HMGB4Q8WW32 186 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 FCRL1Q96LA6 429 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 ANKRD27Q96NW4 1050 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 DPY30Q9C005 99 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 CHRDQ9H2X0 955 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 NT5DC2Q9H857 520 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 LMAN1LQ9HAT1 526 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 RNPEPL1Q9HAU8 725 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 LTB4R2Q9NPC1 389 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 INTS7Q9NVH2 962 aaKnown RBP9.42□□□□□ -0.9
PHGDH-215ENST00000641371 SIRT5Q9NXA8 310 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 VPS29Q9UBQ0 182 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 FBXL21Q9UKT6 434 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 PCOLCE2Q9UKZ9 415 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 SUFUQ9UMX1 484 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 WBP11Q9Y2W2 641 aaKnown RBP9.42□□□□□ -0.9
PHGDH-215ENST00000641371 CDH23Q9H251 3354 aa9.42□□□□□ -0.9
PHGDH-215ENST00000641371 ANTXRLA6NF34 631 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 SHISA7A6NL88 538 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 MEI4A8MW99 385 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 NR5A2O00482 541 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 TRIM38O00635 465 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 FFAR3O14843 346 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 GPR42O15529 346 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 SEC22BO75396 215 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 PDYNP01213 254 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 TNFP01375 233 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 ACP5P13686 325 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 ME2P23368 584 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 VARSP26640 1264 aaKnown RBP9.41□□□□□ -0.9
PHGDH-215ENST00000641371 MAT2AP31153 395 aaKnown RBP9.41□□□□□ -0.9
PHGDH-215ENST00000641371 ACSL1P33121 698 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 HTR6P50406 440 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 CLDN8P56748 225 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 C21orf58P58505 322 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 PSME3P61289 254 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 PPP2CBP62714 309 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms