RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ACSS3Q9H6R3 686 aa25.68■■□□□ 1.7
VEGFA-231ENST00000640499 AKIRIN1Q9H9L7 192 aaPredicted RBP25.68■■□□□ 1.7
VEGFA-231ENST00000640499 POPDC3Q9HBV1 291 aa25.68■■□□□ 1.7
VEGFA-231ENST00000640499 CPNE5Q9HCH3 593 aa25.68■■□□□ 1.7
VEGFA-231ENST00000640499 IGKV1-8A0A0C4DH67 115 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 TMEM150CB9EJG8 249 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 CDC7O00311 574 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 PHGDHO43175 533 aaKnown RBP25.67■■□□□ 1.7
VEGFA-231ENST00000640499 ACSL3O95573 720 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 NTRK1P04629 796 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 HSD17B2P37059 387 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 NAB1Q13506 487 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 USP10Q14694 798 aaKnown RBP25.67■■□□□ 1.7
VEGFA-231ENST00000640499 CEP128Q6ZU80 1094 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 CACNA2D3Q8IZS8 1091 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 NLGN4XQ8N0W4 816 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 NBEAQ8NFP9 2946 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 NLGN4YQ8NFZ3 816 aaPredicted RBP25.67■■□□□ 1.7
VEGFA-231ENST00000640499 OR8K5Q8NH50 307 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 MCOLN3Q8TDD5 553 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 ACAT2Q9BWD1 397 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 TXLNGYQ9BZA5 131 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 SYTL2Q9HCH5 934 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 SLC6A20Q9NP91 592 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.67■■□□□ 1.7
VEGFA-231ENST00000640499 TXNDC16Q9P2K2 825 aa25.67■■□□□ 1.7
VEGFA-231ENST00000640499 LOC101059948A0A1B0GTJ6 334 aa25.66■■□□□ 1.7
VEGFA-231ENST00000640499 ESPNB1AK53 854 aa25.66■■□□□ 1.7
VEGFA-231ENST00000640499 CYP2A7P20853 494 aa25.66■■□□□ 1.7
VEGFA-231ENST00000640499 SPRP35270 261 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-231ENST00000640499 ILF2Q12905 390 aaKnown RBP25.66■■□□□ 1.7
VEGFA-231ENST00000640499 MAP7Q14244 749 aa25.66■■□□□ 1.7
VEGFA-231ENST00000640499 PPP1R3AQ16821 1122 aa25.66■■□□□ 1.7
VEGFA-231ENST00000640499 SPATA6LQ8N4H0 392 aa25.66■■□□□ 1.7
VEGFA-231ENST00000640499 NKAPQ8N5F7 415 aaKnown RBP25.66■■□□□ 1.7
VEGFA-231ENST00000640499 CCDC138Q96M89 665 aa25.66■■□□□ 1.7
VEGFA-231ENST00000640499 CCNL2Q96S94 520 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-231ENST00000640499 SPRTNQ9H040 489 aaPredicted RBP25.66■■□□□ 1.7
VEGFA-231ENST00000640499 PRORYQ9H606 182 aa25.66■■□□□ 1.7
VEGFA-231ENST00000640499 SYNPO2LQ9H987 977 aa25.66■■□□□ 1.7
VEGFA-231ENST00000640499 GPAMQ9HCL2 828 aa25.66■■□□□ 1.7
VEGFA-231ENST00000640499 LOC400499M0QZD8 3231 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 TARM1B6A8C7 271 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 CTSVO60911 334 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 FKBP9O95302 570 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 MYBL2P10244 700 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 CSRP3P50461 194 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 CYB5D1Q6P9G0 228 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 SYTL1Q8IYJ3 562 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 ANKRD7Q92527 254 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 ZUFSPQ96AP4 578 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 MRRFQ96E11 262 aaKnown RBP25.65■■□□□ 1.7
VEGFA-231ENST00000640499 CYTH2Q99418 400 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 TAC3Q9UHF0 121 aa25.65■■□□□ 1.7
VEGFA-231ENST00000640499 MGAQ8IWI9 3026 aa25.64■■□□□ 1.7
VEGFA-231ENST00000640499 TERTO14746 1132 aaKnown RBP25.64■■□□□ 1.7
VEGFA-231ENST00000640499 SCRG1O75711 98 aa25.64■■□□□ 1.7
VEGFA-231ENST00000640499 LIFP15018 202 aa25.64■■□□□ 1.7
VEGFA-231ENST00000640499 F8A1P23610 371 aa25.64■■□□□ 1.7
VEGFA-231ENST00000640499 PRDX1Q06830 199 aaKnown RBP25.64■■□□□ 1.7
VEGFA-231ENST00000640499 COL9A2Q14055 689 aaPredicted RBP25.64■■□□□ 1.7
VEGFA-231ENST00000640499 TEX35Q5T0J7 233 aa25.64■■□□□ 1.7
VEGFA-231ENST00000640499 FBXO42Q6P3S6 717 aa25.64■■□□□ 1.7
VEGFA-231ENST00000640499 C6orf15Q6UXA7 325 aaPredicted RBP25.64■■□□□ 1.7
VEGFA-231ENST00000640499 CMC1Q7Z7K0 106 aa25.64■■□□□ 1.7
VEGFA-231ENST00000640499 GSPT2Q8IYD1 628 aaKnown RBP25.64■■□□□ 1.7
VEGFA-231ENST00000640499 UBXN10Q96LJ8 280 aa25.64■■□□□ 1.7
VEGFA-231ENST00000640499 UNKQ9C0B0 810 aaKnown RBP25.64■■□□□ 1.7
VEGFA-231ENST00000640499 ATG10Q9H0Y0 220 aa25.64■■□□□ 1.7
VEGFA-231ENST00000640499 NOVA2Q9UNW9 492 aaKnown RBP25.64■■□□□ 1.7
VEGFA-231ENST00000640499 HEATR5BQ9P2D3 2071 aa25.64■■□□□ 1.69
VEGFA-231ENST00000640499 NPEPPSL1A6NEC2 478 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 PHBP35232 272 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 RPA3P35244 121 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-231ENST00000640499 RAB10P61026 200 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 GPS2Q13227 327 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 MANEAQ5SRI9 462 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 ICE2Q659A1 982 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 AGTRAPQ6RW13 159 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 TMEM126BQ8IUX1 230 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 MCATQ8IVS2 390 aaKnown RBP25.63■■□□□ 1.69
VEGFA-231ENST00000640499 UHMK1Q8TAS1 419 aaKnown RBP25.63■■□□□ 1.69
VEGFA-231ENST00000640499 DPH7Q9BTV6 452 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 WDR70Q9NW82 654 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 EURLQ9NYK6 297 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 SERTAD3Q9UJW9 196 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 PLCL2Q9UPR0 1127 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 SH2B3Q9UQQ2 575 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 PCDHB3Q9Y5E6 796 aa25.63■■□□□ 1.69
VEGFA-231ENST00000640499 OR2A25A4D2G3 310 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 ZNF839A8K0R7 811 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 MAP3K7O43318 606 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 SLC35E2BP0CK96 405 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 STMN1P16949 149 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 RORAP35398 523 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 STAT5AP42229 794 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 SLC12A2P55011 1212 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 ITGA1P56199 1179 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 TBPL1P62380 186 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 ABHD18Q0P651 414 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms