RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 NTMT1Q9BV86 223 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 CCNB1IP1Q9NPC3 277 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 SIRT5Q9NXA8 310 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 KIF17Q9P2E2 1029 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 SAMHD1Q9Y3Z3 626 aaKnown RBP10.63□□□□□ -0.71
SNIP1-204ENST00000638725 GOLGA8CPA6NN73 597 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 RFXANKO14593 260 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 PCDHGA12O60330 932 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 DUSP11O75319 330 aaKnown RBP10.63□□□□□ -0.71
SNIP1-204ENST00000638725 UPK1BO75841 260 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 GJB5O95377 273 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 DNAJA1P31689 397 aaKnown RBP10.63□□□□□ -0.71
SNIP1-204ENST00000638725 RCVRNP35243 200 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 CLK1P49759 484 aaKnown RBP10.63□□□□□ -0.71
SNIP1-204ENST00000638725 NEK2P51955 445 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 CLDN8P56748 225 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 ARHGEF7Q14155 803 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 PRSS36Q5K4E3 855 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 ZCCHC8Q6NZY4 707 aaKnown RBP10.63□□□□□ -0.71
SNIP1-204ENST00000638725 CEP295NLQ96MC4 621 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 SIAEQ9HAT2 523 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 AASDHPPTQ9NRN7 309 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 KRT84Q9NSB2 600 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 THG1LQ9NWX6 298 aaKnown RBP10.63□□□□□ -0.71
SNIP1-204ENST00000638725 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.63□□□□□ -0.71
SNIP1-204ENST00000638725 VWA8A3KMH1 1905 aa10.63□□□□□ -0.71
SNIP1-204ENST00000638725 MTMR11A4FU01 709 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 CLDN24A6NM45 220 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 GAPDHSO14556 408 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 VNN2O95498 520 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 FABP3P05413 133 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 MAGP20916 626 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 DGKAP23743 735 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 FADDQ13158 208 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ATXN7L2Q5T6C5 722 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 DEPDC1Q5TB30 811 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 KIAA1614Q5VZ46 1190 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 RNF219Q5W0B1 726 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 NCEH1Q6PIU2 408 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 RNF19BQ6ZMZ0 732 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 RNF165Q6ZSG1 346 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 TSPYL5Q86VY4 417 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 POC5Q8NA72 575 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 DNAJB8Q8NHS0 232 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 APH1BQ8WW43 257 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 SELENOMQ8WWX9 145 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 DNASE1L2Q92874 299 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 TBC1D20Q96BZ9 403 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 SIGLEC11Q96RL6 698 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 SLX1AQ9BQ83 275 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 VPS4AQ9UN37 437 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ATP11BQ9Y2G3 1177 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ILVBLA1L0T0 632 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 NBNO60934 754 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 CLDN11O75508 207 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 KCNK2O95069 426 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 NTRK1P04629 796 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ZDHHC11BP0C7U3 371 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 SDC1P18827 310 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 EPORP19235 508 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 EFNA1P20827 205 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 SLC11A2P49281 568 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 RPP38P78345 283 aaKnown RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ZNF177Q13360 481 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 PLEKHG6Q3KR16 790 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ZNF404Q494X3 552 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ATAD3BQ5T9A4 648 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 STEAP3Q658P3 488 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 RSPO2Q6UXX9 243 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 Q6ZPB1 254 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 NEK10Q6ZWH5 1172 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 RTN4RL1Q86UN2 441 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ZBTB2Q8N680 514 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 FAM83FQ8NEG4 500 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 SLC38A4Q969I6 547 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ITPAQ9BY32 194 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 C6orf62Q9GZU0 229 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 NACA2Q9H009 215 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 MIR1-1HGQ9H1L0 117 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ASB8Q9H765 288 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 LATS2Q9NRM7 1088 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 ERVK-11Q9UQG0 969 aa10.62□□□□□ -0.71
SNIP1-204ENST00000638725 NUP214P35658 2090 aaPredicted RBP10.62□□□□□ -0.71
SNIP1-204ENST00000638725 METTL15A6NJ78 407 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 AIREO43918 545 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 STK16O75716 305 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 FKBP9O95302 570 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 PGLSO95336 258 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 CLDN9O95484 217 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 DLGAP3O95886 979 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 KRT6AP02538 564 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 KLKB1P03952 638 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 KRT6BP04259 564 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 SPNP16150 400 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 HMGCLP35914 325 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 KRT6CP48668 564 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 PCYT1AP49585 367 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 NKX2-5P52952 324 aaPredicted RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 CDC20Q12834 499 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms