RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 XKR7Q5GH72 579 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 C9orf64Q5T6V5 341 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 HENMT1Q5T8I9 393 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 SDE2Q6IQ49 451 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 DUS1LQ6P1R4 473 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 PARM1Q6UWI2 310 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 PLD3Q8IV08 490 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 ZNF786Q8N393 782 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 OR7A2PQ8NGA2 310 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 ATL1Q8WXF7 558 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 LMLNQ96KR4 655 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 PKP4Q99569 1192 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 CCT7Q99832 543 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 TRMT61BQ9BVS5 477 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 OAZ3Q9UMX2 235 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 DGKBQ9Y6T7 804 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 MAGEB17A8MXT2 336 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 NUAK1O60285 661 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 ANXA4P09525 319 aaPredicted RBP9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 CISD3P0C7P0 127 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 SLC7A1P30825 629 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 KIR3DL1P43629 444 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 AP1S2P56377 157 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 SLBPQ14493 270 aaKnown RBP eCLIP9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 CAPN13Q6MZZ7 669 aaPredicted RBP9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 ZCCHC8Q6NZY4 707 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 KIAA1324Q6UXG2 1013 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 DPPA4Q7L190 304 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 CSGALNACT1Q8TDX6 532 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 TMEM125Q96AQ2 219 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 DTD2Q96FN9 168 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 RMND5AQ9H871 391 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 RAD18Q9NS91 495 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 FBXL12Q9NXK8 326 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 STOX2Q9P2F5 926 aaPredicted RBP9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 PCDHGB4Q9UN71 923 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 TRPM6Q9BX84 2022 aa9.4□□□□□ -0.9
CACNA1A-248ENST00000637774 QSOX1O00391 747 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 LDLRP01130 860 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 ETS2P15036 469 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 ZNF8P17098 575 aaPredicted RBP9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 HNMTP50135 292 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 CLCNKAP51800 687 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 RPS13P62277 151 aaKnown RBP9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 BNIP2Q12982 314 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 HIST2H2ACQ16777 129 aaPredicted RBP9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 FAM46CQ5VWP2 391 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 HIST2H2AA3Q6FI13 130 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 LRRC70Q7Z2Q7 622 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 AMZ2Q86W34 360 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 TCAIMQ8N3R3 496 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 MINDY1Q8N5J2 469 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 ADCY4Q8NFM4 1077 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 SP7Q8TDD2 431 aaPredicted RBP9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 FGF14Q92915 247 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 INPP5KQ9BT40 448 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 CHID1Q9BWS9 393 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 VPS29Q9UBQ0 182 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 SNX8Q9Y5X2 465 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 STON1Q9Y6Q2 735 aa9.4□□□□□ -0.91
CACNA1A-248ENST00000637774 CD72P21854 359 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 CD9P21926 228 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 MAPK1P28482 360 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 TBPL1P62380 186 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 CDKL1Q00532 357 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 PLCL1Q15111 1095 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 PDE12Q6L8Q7 609 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 FAM20CQ8IXL6 584 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 OFCC1Q8IZS5 231 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 JPH3Q8WXH2 748 aaPredicted RBP9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 TFGQ92734 400 aaPredicted RBP9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 NEIL2Q969S2 332 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 LRIG1Q96JA1 1093 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 SAMD11Q96NU1 681 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 PLA2G2FQ9BZM2 168 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 XKR8Q9H6D3 395 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 EEDO75530 441 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 P2RY2P41231 377 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 IST1P53990 364 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 CYP4F3Q08477 520 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 SPIDRQ14159 915 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 NOXRED1Q6NXP6 359 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 TMEM132CQ8N3T6 1108 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 ZNF740Q8NDX6 193 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 DDHD1Q8NEL9 900 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 OR5AR1Q8NGP9 310 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 BIRC7Q96CA5 298 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 TPD52L3Q96J77 140 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 HIC2Q96JB3 615 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 CCDC138Q96M89 665 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 FERD3LQ96RJ6 166 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 C1QTNF3Q9BXJ4 246 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 GRIP2Q9C0E4 1043 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 REXO4Q9GZR2 422 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 RPF2Q9H7B2 306 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 ACTR3BQ9P1U1 418 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 TRPS1Q9UHF7 1281 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 RIMS3Q9UJD0 308 aa9.39□□□□□ -0.91
CACNA1A-248ENST00000637774 ASPDHA6ND91 283 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms