RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 RASSF2P50749 326 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 RAB28P51157 221 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 IRF8Q02556 426 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 CHIT1Q13231 466 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 KRT33BQ14525 404 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 SQLEQ14534 574 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 CLCA4Q14CN2 919 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 PRAMEF14Q5SWL7 426 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 PRAMEF13Q5VWM6 474 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 RD3Q7Z3Z2 195 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 SPATA19Q7Z5L4 167 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 NRROSQ86YC3 692 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 DCBLD1Q8N8Z6 715 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 OR2L8Q8NGY9 312 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 SMPDL3AQ92484 453 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 PTCD3Q96EY7 689 aaKnown RBP14.86□□□□□ -0.03
CLN6-219ENST00000637329 CAMK1GQ96NX5 476 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 OR4K3Q96R72 315 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 FERD3LQ96RJ6 166 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 EFCAB11Q9BUY7 163 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 TM9SF3Q9HD45 589 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 PRDM8Q9NQV8 689 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 TBC1D29Q9UFV1 150 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 TDRKHQ9Y2W6 561 aaKnown RBP14.86□□□□□ -0.03
CLN6-219ENST00000637329 RNF11Q9Y3C5 154 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 CFAP20Q9Y6A4 193 aaKnown RBP14.86□□□□□ -0.03
CLN6-219ENST00000637329 VPS13AQ96RL7 3174 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 KIR2DS5A0A0G2JLQ3 304 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 A0A0G2JNG1 304 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 OR5K4A6NMS3 321 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 E7EQ34 232 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 NPIPB8E9PQR5 432 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 H0YIV9 168 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 KIR2DS3K7RE56 304 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 SLC28A1O00337 649 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 MANBAO00462 879 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 LAMTOR5O43504 91 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 RGS14O43566 566 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 ULK1O75385 1050 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 PDGFBP01127 241 aaPredicted RBP14.85□□□□□ -0.03
CLN6-219ENST00000637329 NME1P15531 152 aaKnown RBP14.85□□□□□ -0.03
CLN6-219ENST00000637329 LBPP18428 481 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 BCKDHBP21953 392 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 HTR6P50406 440 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 LAPTM5Q13571 262 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 UBAP2LQ14157 1087 aaKnown RBP14.85□□□□□ -0.03
CLN6-219ENST00000637329 KIR2DS5Q14953 304 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 HERC3Q15034 1050 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 XKR6Q5GH73 641 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 ATG9BQ674R7 924 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 DUS1LQ6P1R4 473 aaKnown RBP14.85□□□□□ -0.03
CLN6-219ENST00000637329 IL27RAQ6UWB1 636 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 TRIM46Q7Z4K8 759 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 LONP2Q86WA8 852 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 MYLK4Q86YV6 388 aaPredicted RBP14.85□□□□□ -0.03
CLN6-219ENST00000637329 PPFIBP2Q8ND30 876 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 C1orf216Q8TAB5 229 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 ZFPM2Q8WW38 1151 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 TUBGCP3Q96CW5 907 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 REPS1Q96D71 796 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 PRR11Q96HE9 360 aaPredicted RBP14.85□□□□□ -0.03
CLN6-219ENST00000637329 PPP3R2Q96LZ3 170 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 C3orf30Q96M34 536 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 AKTIPQ9H8T0 292 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 ARMCX1Q9P291 453 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 APOBEC3BQ9UH17 382 aaKnown RBP14.85□□□□□ -0.03
CLN6-219ENST00000637329 COPG1Q9Y678 874 aaKnown RBP14.85□□□□□ -0.03
CLN6-219ENST00000637329 EML5Q05BV3 1969 aa14.85□□□□□ -0.03
CLN6-219ENST00000637329 OR52A4PA6NMU1 304 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 PRR5-ARHGAP8B1AHC4 643 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 TLR4O00206 839 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 CSF2P04141 144 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 LINC00032P0C843 101 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 HSD3B1P14060 373 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 IDO1P14902 403 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 PCSK2P16519 638 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 HSD3B2P26439 372 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 AK4P27144 223 aaPredicted RBP14.84□□□□□ -0.03
CLN6-219ENST00000637329 SHMT2P34897 504 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 SCTRP47872 440 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 MNAT1P51948 309 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 STX1BP61266 288 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 ERVK-8P63133 956 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 CSTF3Q12996 717 aaKnown RBP14.84□□□□□ -0.03
CLN6-219ENST00000637329 MAD2L1Q13257 205 aaPredicted RBP14.84□□□□□ -0.03
CLN6-219ENST00000637329 DOC2AQ14183 400 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 PUM1Q14671 1186 aaKnown RBP eCLIP14.84□□□□□ -0.03
CLN6-219ENST00000637329 GSTA3Q16772 222 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 SPRED3Q2MJR0 410 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 ATP6AP1LQ52LC2 224 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 PAGE2BQ5JRK9 111 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 TCHHL1Q5QJ38 904 aaPredicted RBP14.84□□□□□ -0.03
CLN6-219ENST00000637329 FRG2Q64ET8 278 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 SLC30A9Q6PML9 568 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 SLCO4C1Q6ZQN7 724 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 TREML1Q86YW5 311 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 PARP9Q8IXQ6 854 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 SDR16C5Q8N3Y7 309 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 AVL9Q8NBF6 648 aa14.84□□□□□ -0.03
CLN6-219ENST00000637329 OR52E1Q8NGJ3 308 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms