RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TSACCQ96A04 125 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 HSPBAP1Q96EW2 488 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 HSFY1Q96LI6 401 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 UTS2RQ9UKP6 389 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 SMIM35A0A1B0GVV1 85 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 A0A1W2PPK0 400 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 RPS9P46781 194 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 IRF9Q00978 393 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 CERS5Q8N5B7 392 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 CDC42BPAQ5VT25 1732 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 PDCD5O14737 125 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 NRP1O14786 923 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 CHRNA1P02708 482 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 THRBP10828 461 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 MTHFD1P11586 935 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 EOGTQ5NDL2 527 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 DCDC5Q6ZRR9 648 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 SNX29P2Q8IUI4 249 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 SMARCD2Q92925 531 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 PIP5K1BO14986 540 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 PSMD10O75832 226 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 PTX3P26022 381 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 CLCQ05315 142 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 STK11Q15831 433 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 PDK4Q16654 411 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 GPR153Q6NV75 609 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 GDPD4Q6W3E5 623 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 DNAJB7Q7Z6W7 309 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 OR13C4Q8NGS5 318 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 XKR8Q9H6D3 395 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 DNAJC27Q9NZQ0 273 aa17.46■□□□□ 0.39
CACNA1A-227ENST00000636549 PPEF2O14830 753 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 OR2B6P58173 313 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 CARD16Q5EG05 197 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 XYLT1Q86Y38 959 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 LRRC46Q96FV0 321 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 DHX15O43143 795 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 SLC35F1Q5T1Q4 408 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 KANK2Q63ZY3 851 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 TMEM225Q6GV28 225 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 MAPK15Q8TD08 544 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 LRRC58Q96CX6 371 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 TCRBV9S1A1TA0A576 114 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 MAGEB17A8MXT2 336 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 IST1P53990 364 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 ATP6V0D1P61421 351 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 ST3GAL4Q11206 333 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 CDK10Q15131 360 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 HYAL4Q2M3T9 481 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 CPSF7Q8N684 471 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 FAM47BQ8NA70 645 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 NSMAFQ92636 917 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 VCPIP1Q96JH7 1222 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 EHD1Q9H4M9 534 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 PDZD7Q9H5P4 517 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 TRPV4Q9HBA0 871 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 GRHL1Q9NZI5 618 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 NPIPA2E9PIF3 369 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 NPIPA3F8WFD2 350 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 CTU1Q7Z7A3 348 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 ZNF100Q8IYN0 542 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 HNRNPLLQ8WVV9 542 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 CSPG4P5Q96PW8 444 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 KCNH6Q9H252 994 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 ELOVL7A1L3X0 281 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 OR14I1A6ND48 311 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 STYXQ8WUJ0 223 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 AP4B1Q9Y6B7 739 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 SLC30A4O14863 429 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 UGT2B11O75310 529 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 MPIP34949 423 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 LRRC37A5PQ49AS3 106 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 GTF2IRD2BQ6EKJ0 949 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 ARSKQ6UWY0 536 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 TMPPEQ6ZT21 453 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 GTF2IRD2Q86UP8 949 aa17.45■□□□□ 0.38
CACNA1A-227ENST00000636549 E7ENQ6 273 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 ZNF3P17036 446 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 RBMS1P29558 406 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 GALK2Q01415 458 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 GBE1Q04446 702 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 ZNF554Q86TJ5 538 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 AKAP14Q86UN6 197 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 RC3H2Q9HBD1 1191 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 FBXO9Q9UK97 447 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 BACE2Q9Y5Z0 518 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 LCN1P1Q5VSP4 162 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 NUSAP1Q9BXS6 441 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 AMBNQ9NP70 447 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 LYARQ9NX58 379 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 SERTAD3Q9UJW9 196 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 PCDH7O60245 1069 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 ADH7P40394 386 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 SCARB2Q14108 478 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 PPA1Q15181 289 aa17.44■□□□□ 0.38
CACNA1A-227ENST00000636549 OLFML1Q6UWY5 402 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms