RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	KCNJ16	Q9NPI9	418 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	ENAM	Q9NRM1	1142 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	IL17RB	Q9NRM6	502 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	IGSF9	Q9P2J2	1179 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	SLC7A8	Q9UHI5	535 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	WASF3	Q9UPY6	502 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	TMX2	Q9Y320	296 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	TLL2	Q9Y6L7	1015 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	FMO3	P31513	532 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	RPL26	P61254	145 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	MVK	Q03426	396 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	C4orf17	Q53FE4	359 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	NUP54	Q7Z3B4	507 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	PSD4	Q8NDX1	1056 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	RPLP0P6	Q8NHW5	317 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	SNX27	Q96L92	541 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	PCDHB18P	Q96TA0	734 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	PRRG4	Q9BZD6	226 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	IL22	Q9GZX6	179 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	ACTR3B	Q9P1U1	418 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	ATG4B	Q9Y4P1	393 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	PCDHB9	Q9Y5E1	797 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	FGB	P02675	491 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	RPL23A	P62750	156 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	ZNF311	Q5JNZ3	666 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	LDB1	Q86U70	411 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	TCTE3	Q8IZS6	198 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	NKAP	Q8N5F7	415 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	RBM15B	Q8NDT2	890 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	P2RX7	Q99572	595 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	RNF208	Q9H0X6	261 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	C12orf65	Q9H3J6	166 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	IMP3	Q9NV31	184 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348		A0A1W2PQ67	120 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	LRRN3	E7EW58	273 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	EEF1A1	P68104	462 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	DGKZ	Q13574	1117 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	EEF1A1P5	Q5VTE0	462 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	KCNIP4	Q6PIL6	250 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	AGBL3	Q8NEM8	1001 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	RERG	Q96A58	199 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	PPM1M	Q96MI6	270 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	BEX2	Q9BXY8	128 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	ELOVL4	Q9GZR5	314 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	LRRN3	Q9H3W5	708 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	BEX1	Q9HBH7	125 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	TMEM248	Q9NWD8	314 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	MRTO4	Q9UKD2	239 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	ST14	Q9Y5Y6	855 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	WASF2	Q9Y6W5	498 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348		A0A1W2PPM1	405 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	APOC4-APOC2	K7ER74	178 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	GRIN3B	O60391	1043 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	FAM155B	O75949	473 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	APOC2	P02655	101 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	ITGAV	P06756	1048 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	GSTM2	P28161	218 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	CCR10	P46092	362 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	PRKX	P51817	358 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	TGFBI	Q15582	683 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	NPTX1	Q15818	432 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	CREB3L2	Q70SY1	520 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	SLC7A5P1	Q8MH63	180 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	SVBP	Q8N300	66 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	LINGO1	Q96FE5	620 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	MYRFL	Q96LU7	910 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	TSSK3	Q96PN8	268 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	STRA6	Q9BX79	667 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	FOLH1B	Q9HBA9	442 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	PPP1R14D	Q9NXH3	145 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	AK6	Q9Y3D8	172 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	PCDHGA1	Q9Y5H4	931 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	URAD	A6NGE7	173 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	NUPL2	O15504	423 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	XRCC1	P18887	633 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	ZNF132	P52740	706 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	BID	P55957	195 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	FXYD6P3	P58550	94 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	STK11	Q15831	433 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	IQCF1	Q8N6M8	205 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	OR4C5	Q8NGB2	326 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	TMEM209	Q96SK2	561 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	SNRNP25	Q9BV90	132 aa	Known RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	SLC39A8	Q9C0K1	460 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	RNF32	Q9H0A6	362 aa		11.12	□□□□□ -0.63
SRSF4-208	ENST00000634348	TRUB2	O95900	331 aa	Known RBP	11.11	□□□□□ -0.63
SRSF4-208	ENST00000634348	RBMX	P38159	391 aa	Known RBP	11.11	□□□□□ -0.63
SRSF4-208	ENST00000634348	ELOA	Q14241	798 aa	Known RBP	11.11	□□□□□ -0.63
SRSF4-208	ENST00000634348	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.11	□□□□□ -0.63
SRSF4-208	ENST00000634348	RELL1	Q8IUW5	271 aa		11.11	□□□□□ -0.63
SRSF4-208	ENST00000634348	GTPBP3	Q969Y2	492 aa	Known RBP	11.11	□□□□□ -0.63
SRSF4-208	ENST00000634348	CDCA5	Q96FF9	252 aa		11.11	□□□□□ -0.63
SRSF4-208	ENST00000634348	PIWIL1	Q96J94	861 aa	Known RBP	11.11	□□□□□ -0.63
SRSF4-208	ENST00000634348	IDI2	Q9BXS1	227 aa		11.11	□□□□□ -0.63
SRSF4-208	ENST00000634348	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.11	□□□□□ -0.63
SRSF4-208	ENST00000634348		A0A0G2JN53	185 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms