RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NKX2-8O15522 239 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 KCNN4O15554 427 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SUV39H1O43463 412 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 KDELR3O43731 214 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 AVILO75366 819 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ALX3O95076 343 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TPSB2P20231 275 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 KELP23276 732 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 GRK2P25098 689 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SERPINA4P29622 427 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 UGT1A3P35503 534 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 GRK3P35626 688 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ATP5OP48047 213 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 POLD2P49005 469 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 MLLT10P55197 1068 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 BCL2L1Q07817 233 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SLC10A2Q12908 348 aaPredicted RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 LAPTM4AQ15012 233 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 PRKD1Q15139 912 aaPredicted RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 PTPRRQ15256 657 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TPSAB1Q15661 275 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 DEFB109BQ30KR1 87 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ANKRD34AQ69YU3 496 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 RAET1GQ6H3X3 334 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 BORAQ6PGQ7 559 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SHISA2Q6UWI4 295 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 BNIPLQ7Z465 357 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SLC26A11Q86WA9 606 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 HEATR4Q86WZ0 1026 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ZSWIM9Q86XI8 627 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 CDKL3Q8IVW4 592 aaPredicted RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ARMC10Q8N2F6 343 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 CISD2Q8N5K1 135 aaKnown RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 RTL3Q8N8U3 475 aaKnown RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TMEM52Q8NDY8 209 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 AGAP11Q8TF27 550 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SNRNP27Q8WVK2 155 aaKnown RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 DLG3Q92796 817 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 OLFM3Q96PB7 478 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 LRRC37BQ96QE4 947 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 CINPQ9BW66 212 aaPredicted RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 ATP13A3Q9H7F0 1226 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 STARD5Q9NSY2 213 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TMEM9Q9P0T7 183 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 LUZP4Q9P127 313 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 BAIAP2L1Q9UHR4 511 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 CD84Q9UIB8 345 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 LNPEPQ9UIQ6 1025 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 LRBAP50851 2863 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 POLEQ07864 2286 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 PRSS38A1L453 326 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 WASH4PA8MWX3 477 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 FAM229AH3BQW9 127 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 B4GAT1O43505 415 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SNX2O60749 519 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TGDSO95455 350 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 PTX3P26022 381 aaPredicted RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 MTM1Q13496 603 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 FAM91A1Q658Y4 838 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 STEAP4Q687X5 459 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 NLRP9Q7RTR0 991 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 CCDC91Q7Z6B0 441 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 GPR156Q8NFN8 814 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 C12orf65Q9H3J6 166 aaKnown RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 GPN2Q9H9Y4 310 aaPredicted RBP4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SAR1AQ9NR31 198 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SMYD2Q9NRG4 433 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 SLC39A1Q9NY26 324 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 TMEM98Q9Y2Y6 226 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 PLEKHM1Q9Y4G2 1056 aa4.74□□□□□ -1.65
LINC00550-201ENST00000629293 LRRK1Q38SD2 2015 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 FAM159BA6NKW6 160 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 EFCAB7A8K855 629 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CXorf49A8MYA2 514 aaPredicted RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 GOLGA8RI6L899 631 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 INPP4BO15327 924 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 METTL18O95568 372 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 MT-ND3P03897 115 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ITGB2P05107 769 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 INHBAP08476 426 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 LIFP15018 202 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ZFXP17010 805 aaPredicted RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CTPS1P17812 591 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ALDH3A1P30838 453 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CCKBRP32239 447 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 MMP12P39900 470 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 NR2C2P49116 596 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 POLE2P56282 527 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 POU4F1Q01851 419 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 GBE1Q04446 702 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 FOXM1Q08050 763 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 NFATC2Q13469 925 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 SEMA5AQ13591 1074 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CYTH1Q15438 398 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ANKS6Q68DC2 871 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 NCBP2-AS2Q69YL0 99 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 PGM2L1Q6PCE3 622 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ARHGAP36Q6ZRI8 547 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 STRADAQ7RTN6 431 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms