RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 MYO1AQ9UBC5 1043 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 PLAGL1Q9UM63 463 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 SCINQ9Y6U3 715 aa13.2□□□□□ -0.3
SNX1-214ENST00000625244 FITM1A5D6W6 292 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 A8MUI8 341 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 IDSB3KWA1 339 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 CXCR2P25025 360 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 CD96P40200 585 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 CHRNA4P43681 627 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 OR1C1Q15619 314 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 DEFB113Q30KQ7 82 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 SIRPB2Q5JXA9 342 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 NAPRTQ6XQN6 538 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 APTXQ7Z2E3 356 aaKnown RBP13.19□□□□□ -0.3
SNX1-214ENST00000625244 IRF2BP2Q7Z5L9 587 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.19□□□□□ -0.3
SNX1-214ENST00000625244 CD163Q86VB7 1156 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 CDC20BQ86Y33 519 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 CLYBLQ8N0X4 340 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 SLC25A41Q8N5S1 370 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 TTC29Q8NA56 475 aaPredicted RBP13.19□□□□□ -0.3
SNX1-214ENST00000625244 BLOC1S5Q8TDH9 187 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 ZNF285Q96NJ3 590 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 ZNF700Q9H0M5 742 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 ZNF395Q9H8N7 513 aaPredicted RBP13.19□□□□□ -0.3
SNX1-214ENST00000625244 ENAMQ9NRM1 1142 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 OR6C2Q9NZP2 312 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 STOX2Q9P2F5 926 aaPredicted RBP13.19□□□□□ -0.3
SNX1-214ENST00000625244 TEKT2Q9UIF3 430 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 EDARQ9UNE0 448 aa13.19□□□□□ -0.3
SNX1-214ENST00000625244 IGLV3-12A0A075B6K2 115 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 LOC285095A0A1B0GVY8 99 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 FAM171A2A8MVW0 826 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 FFAR3O14843 346 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 GPR42O15529 346 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 ATE1O95260 518 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 CCDC172P0C7W6 258 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 FERP16591 822 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 SNTB1Q13884 538 aaKnown RBP13.18□□□□□ -0.3
SNX1-214ENST00000625244 SLC14A2Q15849 920 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 TCTE1Q5JU00 501 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 TMEM211Q6ICI0 200 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 PAMR1Q6UXH9 720 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 CHSY3Q70JA7 882 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 GLT6D1Q7Z4J2 308 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 GALNTL5Q7Z4T8 443 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 FAM57AQ8TBR7 257 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 RND1Q92730 232 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 DCUN1D1Q96GG9 259 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 IMMP1LQ96LU5 166 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 SELENOSQ9BQE4 189 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 ASB8Q9H765 288 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 IFNKQ9P0W0 207 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 MKL2Q9ULH7 1088 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 TDRKHQ9Y2W6 561 aaKnown RBP13.18□□□□□ -0.3
SNX1-214ENST00000625244 PKP3Q9Y446 797 aa13.18□□□□□ -0.3
SNX1-214ENST00000625244 LOC102723996A0A087X1L8 192 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 ICAM2P13598 275 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 CD46P15529 392 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 PTGS2P35354 604 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 AP1B1Q10567 949 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 FASTKQ14296 549 aaKnown RBP13.17□□□□□ -0.3
SNX1-214ENST00000625244 PIGHQ14442 188 aaPredicted RBP13.17□□□□□ -0.3
SNX1-214ENST00000625244 KIR2DS3Q14952 304 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 NR1I3Q14994 352 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 FAM214AQ32MH5 1076 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 ACER2Q5QJU3 275 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 CPSF7Q8N684 471 aaKnown RBP13.17□□□□□ -0.3
SNX1-214ENST00000625244 LMNTD1Q8N9Z9 388 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 GOT1L1Q8NHS2 421 aaPredicted RBP13.17□□□□□ -0.3
SNX1-214ENST00000625244 SEC16BQ96JE7 1060 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 NAP1L5Q96NT1 182 aaPredicted RBP13.17□□□□□ -0.3
SNX1-214ENST00000625244 ZNF670Q9BS34 389 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 GLOD4Q9HC38 313 aa13.17□□□□□ -0.3
SNX1-214ENST00000625244 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
SNX1-214ENST00000625244 A0A1B0GTH9 108 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 HYKKA2RU49 373 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 RCCD1A6NED2 376 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 INAFM1C9JVW0 142 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 SRP72O76094 671 aaKnown RBP13.16□□□□□ -0.3
SNX1-214ENST00000625244 HEXBP07686 556 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 TPM1P09493 284 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 ATP1B2P14415 290 aaPredicted RBP13.16□□□□□ -0.3
SNX1-214ENST00000625244 ZNF24P17028 368 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 SSR1P43307 286 aaKnown RBP13.16□□□□□ -0.3
SNX1-214ENST00000625244 EFNA3P52797 238 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 WNT3AP56704 352 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 VSX2P58304 361 aaPredicted RBP13.16□□□□□ -0.3
SNX1-214ENST00000625244 AP2B1P63010 937 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 PMPCAQ10713 525 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 RPA4Q13156 261 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 ZC3H12BQ5HYM0 836 aaKnown RBP13.16□□□□□ -0.3
SNX1-214ENST00000625244 WASHC2DQ5SRD0 308 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 PRMT9Q6P2P2 845 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 ARSKQ6UWY0 536 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 CIARTQ8N365 385 aaPredicted RBP13.16□□□□□ -0.3
SNX1-214ENST00000625244 NIPA2Q8N8Q9 360 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 TMEM178AQ8NBL3 297 aa13.16□□□□□ -0.3
SNX1-214ENST00000625244 KCTD6Q8NC69 237 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms