RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 ZBTB14O43829 449 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 DPM1O60762 260 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 MATN4O95460 622 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 NR1D1P20393 614 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 PAFAH1B1P43034 410 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 GABRA4P48169 554 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 RGS4P49798 205 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 CTBP1Q13363 440 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 ATP1A4Q13733 1029 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 THEMIS2Q5TEJ8 643 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 ZNF385CQ66K41 422 aaPredicted RBP12.54□□□□□ -0.4
ATRX-208ENST00000622960 SYDE1Q6ZW31 735 aaPredicted RBP12.54□□□□□ -0.4
ATRX-208ENST00000622960 MRGPREQ86SM8 312 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 FAM20CQ8IXL6 584 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 PDIK1LQ8N165 341 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 NAT8LQ8N9F0 302 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 OR2L3Q8NG85 312 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 OR2Y1Q8NGV0 311 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 ADAMTS17Q8TE56 1095 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 TM9SF4Q92544 642 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 PTERQ96BW5 349 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 ACAT2Q9BWD1 397 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 TRIM55Q9BYV6 548 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 DDX47Q9H0S4 455 aaKnown RBP12.54□□□□□ -0.4
ATRX-208ENST00000622960 MRPS30Q9NP92 439 aaKnown RBP12.54□□□□□ -0.4
ATRX-208ENST00000622960 CUTCQ9NTM9 273 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 TRMT6Q9UJA5 497 aaKnown RBP12.54□□□□□ -0.4
ATRX-208ENST00000622960 NXT1Q9UKK6 140 aaKnown RBP12.54□□□□□ -0.4
ATRX-208ENST00000622960 SPTA1P02549 2419 aa12.54□□□□□ -0.4
ATRX-208ENST00000622960 HELZ2Q9BYK8 2649 aaKnown RBP12.54□□□□□ -0.4
ATRX-208ENST00000622960 ASH1LQ9NR48 2969 aaKnown RBP12.54□□□□□ -0.4
ATRX-208ENST00000622960 ZCWPW2A0A1B0GU75 182 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 TTLL8A6PVC2 850 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 ARHGEF33A8MVX0 844 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 SMAPO00193 183 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 EIF3FO00303 357 aaPredicted RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 DNALI1O14645 258 aaPredicted RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 NDC80O14777 642 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 ZNF185O15231 689 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 PSIP1O75475 530 aaKnown RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 ALBP02768 609 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 EIF2S1P05198 315 aaKnown RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 CAPN1P07384 714 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 MPC1LP0DKB6 136 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 PSMB5P28074 263 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 GRIA3P42263 894 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 PNLIPRP1P54315 467 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 VSX2P58304 361 aaPredicted RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 GNG11P61952 73 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 CRYMQ14894 314 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 KCTD19Q17RG1 926 aaPredicted RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 HSP90AA5PQ58FG0 334 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 ACSBG2Q5FVE4 666 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 SPANXN3Q5MJ09 141 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 RNASEH2BQ5TBB1 312 aaKnown RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 FCRL6Q6DN72 434 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 ADCK2Q7Z695 626 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 DENND6AQ8IWF6 608 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 INPP5DQ92835 1189 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 RERGQ96A58 199 aaPredicted RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 CABS1Q96KC9 395 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 CAPZA3Q96KX2 299 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 EBNA1BP2Q99848 306 aaKnown RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 ZFYVE21Q9BQ24 234 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 TRIM56Q9BRZ2 755 aaKnown RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 WDR54Q9H977 334 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 PPANQ9NQ55 473 aaKnown RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 IARS2Q9NSE4 1012 aaKnown RBP12.53□□□□□ -0.4
ATRX-208ENST00000622960 CDC23Q9UJX2 597 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 FBXO5Q9UKT4 447 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 NEU2Q9Y3R4 380 aa12.53□□□□□ -0.4
ATRX-208ENST00000622960 TLN1Q9Y490 2541 aaKnown RBP12.52□□□□□ -0.4
ATRX-208ENST00000622960 A0A0J9YVX5 310 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 A6NL46 340 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 H3BMH7 237 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 MYO1CO00159 1063 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 HCRTR1O43613 425 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 IPO13O94829 963 aaKnown RBP12.52□□□□□ -0.41
ATRX-208ENST00000622960 MAGEA3P43357 314 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 CLCN7P51798 805 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 DR1Q01658 176 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 OCA2Q04671 838 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 CUL1Q13616 776 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 GBX1Q14549 363 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 MUM1Q2TAK8 710 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 BBS9Q3SYG4 887 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 CCSMST1Q4G0I0 132 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 FAM69BQ5VUD6 431 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 PRMT9Q6P2P2 845 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 RNF44Q7L0R7 432 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 MYO1HQ8N1T3 1032 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 FBXO15Q8NCQ5 510 aaPredicted RBP12.52□□□□□ -0.41
ATRX-208ENST00000622960 OR2A1Q8NGT9 310 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 SLCO2A1Q92959 643 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 NACC2Q96BF6 587 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 SIGLEC10Q96LC7 697 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 GPR21Q99679 349 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 NAPGQ99747 312 aaPredicted RBP12.52□□□□□ -0.41
ATRX-208ENST00000622960 DPH7Q9BTV6 452 aa12.52□□□□□ -0.41
ATRX-208ENST00000622960 ABCF3Q9NUQ8 709 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms