RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 OR2M4Q96R27 311 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 FERD3LQ96RJ6 166 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 SERPINI1Q99574 410 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 NDUFAF1Q9Y375 327 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 E7ENX8 843 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 G6PDP11413 515 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 CAPN3P20807 821 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 IDSP22304 550 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 HTR1BP28222 390 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 TAP2Q03519 686 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 LRP8Q14114 963 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 TRMT5Q32P41 509 aaKnown RBP20.78■□□□□ 0.92
SPAST-204ENST00000621856 VPS26BQ4G0F5 336 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 DUS1LQ6P1R4 473 aaKnown RBP20.78■□□□□ 0.92
SPAST-204ENST00000621856 PGM2L1Q6PCE3 622 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 BLOC1S3Q6QNY0 202 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 ZNF687Q8N1G0 1237 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 FBXW8Q8N3Y1 598 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 NEIL2Q969S2 332 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 SCARF2Q96GP6 870 aaPredicted RBP20.78■□□□□ 0.92
SPAST-204ENST00000621856 BMFQ96LC9 184 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 WDR92Q96MX6 357 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 CDRT15Q96T59 188 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 WDR37Q9Y2I8 494 aa20.78■□□□□ 0.92
SPAST-204ENST00000621856 PDZK1P1A8MUH7 402 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 PI15O43692 258 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 PCDH1Q08174 1060 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 CACHD1Q5VU97 1274 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 LAYNQ6UX15 382 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 RIPOR1Q6ZS17 1223 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 LRRC56Q8IYG6 542 aaPredicted RBP20.77■□□□□ 0.92
SPAST-204ENST00000621856 TBC1D21Q8IYX1 336 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 DEFB123Q8N688 67 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 OR1E3Q8WZA6 343 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 SPDL1Q96EA4 605 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 TEX37Q96LM6 180 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 HHIPQ96QV1 700 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 INSM2Q96T92 566 aaPredicted RBP20.77■□□□□ 0.92
SPAST-204ENST00000621856 C6orf106Q9H6K1 298 aaPredicted RBP20.77■□□□□ 0.92
SPAST-204ENST00000621856 LTB4R2Q9NPC1 389 aa20.77■□□□□ 0.92
SPAST-204ENST00000621856 FAM234BA2RU67 622 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 RSL1D1O76021 490 aaKnown RBP20.76■□□□□ 0.91
SPAST-204ENST00000621856 APBB3O95704 486 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 IGLV3-19P01714 112 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 NPPBP16860 134 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 CCND1P24385 295 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 VARSP26640 1264 aaKnown RBP20.76■□□□□ 0.91
SPAST-204ENST00000621856 POLR2JP52435 117 aaKnown RBP20.76■□□□□ 0.91
SPAST-204ENST00000621856 PSME3P61289 254 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 DDX39BQ13838 428 aaKnown RBP20.76■□□□□ 0.91
SPAST-204ENST00000621856 PRAMEF14Q5SWL7 426 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 PRAMEF13Q5VWM6 474 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 KIAA0895LQ68EN5 471 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 GCNT7Q6ZNI0 430 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 SLCO4C1Q6ZQN7 724 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 C2orf73Q8N5S3 287 aaPredicted RBP20.76■□□□□ 0.91
SPAST-204ENST00000621856 TSPEARQ8WU66 669 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 CCDC124Q96CT7 223 aaKnown RBP20.76■□□□□ 0.91
SPAST-204ENST00000621856 TOE1Q96GM8 510 aaKnown RBP20.76■□□□□ 0.91
SPAST-204ENST00000621856 IMP3Q9NV31 184 aaKnown RBP20.76■□□□□ 0.91
SPAST-204ENST00000621856 TMEM45AQ9NWC5 275 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 C2orf42Q9NWW7 574 aa20.76■□□□□ 0.91
SPAST-204ENST00000621856 SERTM1A2A2V5 107 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 KRBA1A5PL33 1030 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 ZNF839A8K0R7 811 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 H0YIV9 168 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 HSD17B2P37059 387 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 CASP2P42575 452 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 THOP1P52888 689 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 MTTPP55157 894 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 ZNF33BQ06732 778 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 CSTF3Q12996 717 aaKnown RBP20.75■□□□□ 0.91
SPAST-204ENST00000621856 KRT33BQ14525 404 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 ARHGAP19Q14CB8 494 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 HACD2Q6Y1H2 254 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 RD3Q7Z3Z2 195 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 HPS6Q86YV9 775 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 LIX1Q8N485 282 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 RAB42Q8N4Z0 105 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 SETD7Q8WTS6 366 aaKnown RBP20.75■□□□□ 0.91
SPAST-204ENST00000621856 STMN2Q93045 179 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 CMTM7Q96FZ5 175 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 PDXPQ96GD0 296 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 SHDQ96IW2 340 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 SPATA7Q9P0W8 599 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 CROTQ9UKG9 612 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 SH2B3Q9UQQ2 575 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 PCDHGA11Q9Y5H2 935 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 CCDC154A6NI56 674 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 FAM170BA6NMN3 283 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 SORBS2O94875 1100 aaKnown RBP20.75■□□□□ 0.91
SPAST-204ENST00000621856 PCNAP12004 261 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 OXTRP30559 389 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 CCR5P51681 352 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 RCAN2Q14206 197 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 GAS6Q14393 721 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 CATSPEREQ5SY80 951 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 RETREG3Q86VR2 466 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 RNF175Q8N4F7 328 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 WDR20Q8TBZ3 569 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms