RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 KCTD5Q9NXV2 234 aa8.09□□□□□ -1.11
PTPDC1-204ENST00000620992 ERVK-11Q9UQG0 969 aa8.09□□□□□ -1.11
PTPDC1-204ENST00000620992 MRPS33Q9Y291 106 aaKnown RBP8.09□□□□□ -1.11
PTPDC1-204ENST00000620992 SAMHD1Q9Y3Z3 626 aaKnown RBP8.09□□□□□ -1.11
PTPDC1-204ENST00000620992 A0A1W2PP55 124 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 HCN1O60741 890 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 CHRNA1P02708 482 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 IL6P05231 212 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 C8BP07358 591 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 MTHFD1P11586 935 aaKnown RBP8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 NCK1P16333 377 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 RNF144AP50876 292 aaPredicted RBP8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 MAPK12P53778 367 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 MEF2AQ02078 507 aaPredicted RBP8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 LRRC32Q14392 662 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 UNC50Q53HI1 259 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 SIRPB2Q5JXA9 342 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 CHRDL2Q6WN34 429 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 RETREG3Q86VR2 466 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 CHERPQ8IWX8 916 aaKnown RBP8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 RLN3Q8WXF3 142 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 MS4A4AQ96JQ5 239 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 AIF1LQ9BQI0 150 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 BTBD1Q9H0C5 482 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 DNAJC15Q9Y5T4 150 aa8.09□□□□□ -1.12
PTPDC1-204ENST00000620992 ANKRD33BA6NCL7 494 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 UPK3BL1B0FP48 263 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 UPK3BL2E5RIL1 263 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 WNT9AO14904 365 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 TRIM24O15164 1050 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 GNAO1P09471 354 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 PRSS56P0CW18 603 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 SAGP10523 405 aaPredicted RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 SLC6A2P23975 617 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 DNAJB1P25685 340 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 ADAM17P78536 824 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 TRAP1Q12931 704 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 GPR17Q13304 367 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 SIM2Q14190 667 aaPredicted RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 GNA13Q14344 377 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 CPTPQ5TA50 214 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 SLC8B1Q6J4K2 584 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 FAM171BQ6P995 826 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 GPR141Q7Z602 305 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 ZNF784Q8NCA9 323 aaPredicted RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 C7orf57Q8NEG2 295 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 UBE2E3Q969T4 207 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 FUBP3Q96I24 572 aaKnown RBP eCLIP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 ZNF597Q96LX8 424 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 CLK4Q9HAZ1 481 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 CSNK1G1Q9HCP0 422 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 TMCO1Q9UM00 188 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 ZNF510Q9Y2H8 683 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 ZSWIM8A7E2V4 1837 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 H3BSH0 61 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 KPNA4O00629 521 aaPredicted RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 NME4O00746 187 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 CACNG3O60359 315 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 B4GALT2O60909 372 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 POP7O75817 140 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 DLGAP3O95886 979 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 CSRP3P50461 194 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 NDST2P52849 883 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 HERVK_113P63132 956 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 RFX4Q33E94 735 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 TMEM31Q5JXX7 168 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 HMBOX1Q6NT76 420 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 FUNDC1Q8IVP5 155 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 THAP3Q8WTV1 239 aaPredicted RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 PPP3R2Q96LZ3 170 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 TRMOQ9BU70 441 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 ERVK-6Q9BXR3 956 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 LINC00597Q9H2U6 94 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 SMOC2Q9H3U7 446 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 MRM3Q9HC36 420 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 URADA6NGE7 173 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 MCIDASD6RGH6 385 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 S1PR4O95977 384 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 ADARP55265 1226 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 DCTN2Q13561 401 aaKnown RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 KDELC1Q6UW63 502 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 LARP4Q71RC2 724 aaKnown RBP eCLIP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 KRT77Q7Z794 578 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 SCD5Q86SK9 330 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 CCDC103Q8IW40 242 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 DHRSXQ8N5I4 330 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 SCAIQ8N9R8 606 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 RANBP9Q96S59 729 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 CCDC177Q9NQR7 707 aaPredicted RBP8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 TMEM181Q9P2C4 612 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 OAZ3Q9UMX2 235 aa8.08□□□□□ -1.12
PTPDC1-204ENST00000620992 AP3D1O14617 1153 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 SLC7A4O43246 635 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 COCHO43405 550 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 FAM163BP0C2L3 166 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 BMP7P18075 431 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 CAPN3P20807 821 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 MAGP20916 626 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 NR4A1P22736 598 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 AHCYP23526 432 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms