RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 TAS2R41P59536 307 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 FKBP1AP62942 108 aaKnown RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 HMGCS1Q01581 520 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 FPGSQ05932 587 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 FADDQ13158 208 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 GTF2H2Q13888 395 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 HEPACAMQ14CZ8 416 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 GPR68Q15743 365 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 TOR1AIP1Q5JTV8 583 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 NDUFAF5Q5TEU4 345 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 GTF2H2CQ6P1K8 395 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 NAPRTQ6XQN6 538 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 ZC3H3Q8IXZ2 948 aaKnown RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 DAW1Q8N136 415 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 CELF2-AS1Q8N7Q2 184 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 YIPF7Q8N8F6 280 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 OR13F1Q8NGS4 319 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 C1orf216Q8TAB5 229 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 SETD6Q8TBK2 473 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 DDX1Q92499 740 aaKnown RBP12.84□□□□□ -0.35
COL1A2-213ENST00000620463 MRIQ9BWK5 157 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 GPR88Q9GZN0 384 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 GPSM3Q9Y4H4 160 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 PCDHGA8Q9Y5G5 932 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 UBIAD1Q9Y5Z9 338 aa12.84□□□□□ -0.35
COL1A2-213ENST00000620463 ARVCFO00192 962 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 GMDSO60547 372 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 STK16O75716 305 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 RPP40O75818 363 aaKnown RBP12.83□□□□□ -0.35
COL1A2-213ENST00000620463 C1RP00736 705 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 DARSP14868 501 aaKnown RBP12.83□□□□□ -0.35
COL1A2-213ENST00000620463 ZNF26P17031 533 aaPredicted RBP12.83□□□□□ -0.35
COL1A2-213ENST00000620463 LHCGRP22888 699 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 MC4RP32245 332 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 PPP3R1P63098 170 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 RACK1P63244 317 aaKnown RBP12.83□□□□□ -0.35
COL1A2-213ENST00000620463 TARDBPQ13148 414 aaKnown RBP eCLIP12.83□□□□□ -0.35
COL1A2-213ENST00000620463 LIPKQ5VXJ0 399 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 SLC25A25Q6KCM7 469 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 PRSS48Q7RTY5 328 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 DNERQ8NFT8 737 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 RPLP0P6Q8NHW5 317 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 PCNPQ8WW12 178 aaKnown RBP12.83□□□□□ -0.35
COL1A2-213ENST00000620463 NDRG1Q92597 394 aaKnown RBP12.83□□□□□ -0.35
COL1A2-213ENST00000620463 BHLHE41Q9C0J9 482 aaPredicted RBP12.83□□□□□ -0.35
COL1A2-213ENST00000620463 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.35
COL1A2-213ENST00000620463 DNAJC27Q9NZQ0 273 aa12.83□□□□□ -0.35
COL1A2-213ENST00000620463 LSM7Q9UK45 103 aaKnown RBP12.83□□□□□ -0.35
COL1A2-213ENST00000620463 UNCXA6NJT0 531 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 CLCA1A8K7I4 914 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 TLR5O60602 858 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 VIPP01282 170 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 CATP04040 527 aaKnown RBP12.83□□□□□ -0.36
COL1A2-213ENST00000620463 PRPS2P11908 318 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 ARFIP1P53367 373 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 ERVK-25P63136 954 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 RAPSNQ13702 412 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 FGL2Q14314 439 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 ZNF697Q5TEC3 545 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 PARP16Q8N5Y8 322 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 NATD1Q8N6N6 113 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 OR4K2Q8NGD2 314 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 HASPINQ8TF76 798 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 CLIC1O00299 241 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 RASGRP1O95267 797 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 IFNA6P05013 189 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 BTG3Q14201 252 aaPredicted RBP12.83□□□□□ -0.36
COL1A2-213ENST00000620463 ATXN7L3Q14CW9 347 aaPredicted RBP12.83□□□□□ -0.36
COL1A2-213ENST00000620463 BCL2L15Q5TBC7 163 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 FKBP1CQ5VVH2 108 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 ZCCHC12Q6PEW1 402 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 ULK3Q6PHR2 472 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 CRTC1Q6UUV9 634 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 METTL7BQ6UX53 244 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 ZNF730Q6ZMV8 503 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 CLIP3Q96DZ5 547 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 RPL10LQ96L21 214 aaKnown RBP12.83□□□□□ -0.36
COL1A2-213ENST00000620463 RBCK1Q9BYM8 510 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 GALPQ9UBC7 116 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 GLS2Q9UI32 602 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 SEPT4O43236 478 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 CHRNA4P43681 627 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 S100A12P80511 92 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 SELPLGQ14242 412 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 SIGIRRQ6IA17 410 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 HACD2Q6Y1H2 254 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 UBQLNLQ8IYU4 475 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 PHACTR4Q8IZ21 702 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 CARNMT1Q8N4J0 409 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 QRFPRQ96P65 431 aa12.83□□□□□ -0.36
COL1A2-213ENST00000620463 PARK7Q99497 189 aaKnown RBP12.83□□□□□ -0.36
COL1A2-213ENST00000620463 ACSL4O60488 711 aa12.82□□□□□ -0.36
COL1A2-213ENST00000620463 TPST2O60704 377 aa12.82□□□□□ -0.36
COL1A2-213ENST00000620463 FCER2P06734 321 aa12.82□□□□□ -0.36
COL1A2-213ENST00000620463 G6PDP11413 515 aa12.82□□□□□ -0.36
COL1A2-213ENST00000620463 BDNFP23560 247 aa12.82□□□□□ -0.36
COL1A2-213ENST00000620463 CRHBPP24387 322 aa12.82□□□□□ -0.36
COL1A2-213ENST00000620463 L1CAMP32004 1257 aa12.82□□□□□ -0.36
COL1A2-213ENST00000620463 XKP51811 444 aa12.82□□□□□ -0.36
COL1A2-213ENST00000620463 EMX1Q04741 257 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms