RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 CLYBLQ8N0X4 340 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 ARL10Q8N8L6 244 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 SNX31Q8N9S9 440 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 FAM181AQ8N9Y4 354 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 LMNTD1Q8N9Z9 388 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 LINC01555Q8NAE3 123 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 OR2I1PQ8NGU4 316 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 OR4C6Q8NH72 309 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 ATP6V1E2Q96A05 226 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 MED8Q96G25 268 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 OR4K3Q96R72 315 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 ZNF382Q96SR6 550 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 HAUS8Q9BT25 410 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 NTMT1Q9BV86 223 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 GTPBP2Q9BX10 602 aaKnown RBP7.76□□□□□ -1.17
CPNE3-209ENST00000620393 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.76□□□□□ -1.17
CPNE3-209ENST00000620393 TWSG1Q9GZX9 223 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 SRMSQ9H3Y6 488 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 STN1Q9H668 368 aaKnown RBP7.76□□□□□ -1.17
CPNE3-209ENST00000620393 SEMA4BQ9NPR2 832 aaPredicted RBP7.76□□□□□ -1.17
CPNE3-209ENST00000620393 PSD3Q9NYI0 1048 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 GPRC5BQ9NZH0 403 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 ZDHHC2Q9UIJ5 367 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 HAO1Q9UJM8 370 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 STK38LQ9Y2H1 464 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 RAP2CQ9Y3L5 183 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 PCDHGB2Q9Y5G2 931 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 KCNE2Q9Y6J6 123 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 EML5Q05BV3 1969 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 THADAQ6YHU6 1953 aa7.76□□□□□ -1.17
CPNE3-209ENST00000620393 PIKFYVEQ9Y2I7 2098 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 SPAG17Q6Q759 2223 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 A0A1W2PPV9 198 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 BTN3A3O00478 584 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 DLL1O00548 723 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 GPR37O15354 613 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 NUDT21O43809 227 aaKnown RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 PRAMEF4O60810 478 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 WFS1O76024 890 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 TGDSO95455 350 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 OTCP00480 354 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 LMNAP02545 664 aaKnown RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 CHRM5P08912 532 aaPredicted RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 EBLN1P0CF75 366 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 GLB1P16278 677 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 GNAZP19086 355 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 EPORP19235 508 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 DRD4P21917 467 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 PRDX3P30048 256 aaKnown RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 NBL1P41271 181 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 CASP2P42575 452 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 RPL14P50914 215 aaKnown RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 CCNG1P51959 295 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 ERVPABLB-1P60509 514 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 TBPL1P62380 186 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 PRDX1Q06830 199 aaKnown RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 CDC16Q13042 620 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 BIRC2Q13490 618 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 TSTA3Q13630 321 aaPredicted RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 PLCL1Q15111 1095 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 TBCCQ15814 346 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 RBBP7Q16576 425 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 THEMIS2Q5TEJ8 643 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 PRAMEF9Q5VWM5 478 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 TCEAL6Q6IPX3 200 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 ZCCHC8Q6NZY4 707 aaKnown RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 NXPE4Q6UWF7 544 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 SLCO4C1Q6ZQN7 724 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 FAM47EQ6ZV65 393 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 GPRIN3Q6ZVF9 776 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 SYVN1Q86TM6 617 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 CUZD1Q86UP6 607 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 HOMEZQ8IX15 550 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 SLC35F3Q8IY50 421 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 ADGRF3Q8IZF5 1079 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 KIRREL3Q8IZU9 778 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 MINDY1Q8N5J2 469 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 ZNF781Q8N8C0 355 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 L3MBTL4Q8NA19 623 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 KYQ8NBH2 561 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 OR6C4Q8NGE1 309 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 OR52B6Q8NGF0 335 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 OR2A1Q8NGT9 310 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 PIWIL2Q8TC59 973 aaKnown RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 AGAP11Q8TF27 550 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 JPH3Q8WXH2 748 aaPredicted RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 TCEAL3Q969E4 200 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 SLC22A18Q96BI1 424 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 GRAMD1AQ96CP6 724 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 SLC38A3Q99624 504 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 SHCBP1LQ9BZQ2 653 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 MID1IP1Q9NPA3 183 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 CCDC177Q9NQR7 707 aaPredicted RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 FGFR1OP2Q9NVK5 253 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 DNAAF2Q9NVR5 837 aaKnown RBP7.75□□□□□ -1.17
CPNE3-209ENST00000620393 PNPOQ9NVS9 261 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 HRASLS2Q9NWW9 162 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 LRIT1Q9P2V4 623 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 ZNF225Q9UK10 706 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 PADI4Q9UM07 663 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms