RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CCDC70Q6NSX1 233 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 SNX20Q7Z614 316 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 MAP7D3Q8IWC1 876 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 ZC3H7AQ8IWR0 971 aaKnown RBP4.34□□□□□ -1.71
SNCA-213ENST00000618500 ACRBPQ8NEB7 543 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 ENOX1Q8TC92 643 aaKnown RBP4.34□□□□□ -1.71
SNCA-213ENST00000618500 SDCCAG3Q96C92 435 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 LRRC46Q96FV0 321 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 RBM41Q96IZ5 413 aaKnown RBP4.34□□□□□ -1.71
SNCA-213ENST00000618500 C10orf90Q96M02 699 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 UTP23Q9BRU9 249 aaKnown RBP4.34□□□□□ -1.71
SNCA-213ENST00000618500 AIPL1Q9NZN9 384 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 CTSFQ9UBX1 484 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 FAM153AQ9UHL3 310 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 C3orf18Q9UK00 162 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 KLF13Q9Y2Y9 288 aaPredicted RBP4.34□□□□□ -1.71
SNCA-213ENST00000618500 PKP3Q9Y446 797 aa4.34□□□□□ -1.71
SNCA-213ENST00000618500 SRP72O76094 671 aaKnown RBP4.34□□□□□ -1.72
SNCA-213ENST00000618500 BMP7P18075 431 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 UGT1A1P22309 533 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 ZNF140P52738 457 aaPredicted RBP4.34□□□□□ -1.72
SNCA-213ENST00000618500 EMP2P54851 167 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 OLIG2Q13516 323 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 KRT33BQ14525 404 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 KRT81Q14533 505 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 FBXO38Q6PIJ6 1188 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 PAOXQ6QHF9 649 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 BZW1Q7L1Q6 419 aaKnown RBP4.34□□□□□ -1.72
SNCA-213ENST00000618500 PHLDB2Q86SQ0 1253 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 CDC20BQ86Y33 519 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 FAM20CQ8IXL6 584 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 SLC22A15Q8IZD6 547 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 GPATCH11Q8N954 259 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 PPHLN1Q8NEY8 458 aaKnown RBP4.34□□□□□ -1.72
SNCA-213ENST00000618500 NEK11Q8NG66 645 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 ZNF398Q8TD17 642 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 CREB3L4Q8TEY5 395 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 SMPDL3BQ92485 455 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 TEKT5Q96M29 485 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 SELENOSQ9BQE4 189 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 MESP1Q9BRJ9 268 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 CLK4Q9HAZ1 481 aaKnown RBP4.34□□□□□ -1.72
SNCA-213ENST00000618500 NEUROD4Q9HD90 331 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 PTGFRNQ9P2B2 879 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 PCSK1NQ9UHG2 260 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 RIMKLBQ9ULI2 386 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 NENFQ9UMX5 172 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 PSMD13Q9UNM6 376 aa4.34□□□□□ -1.72
SNCA-213ENST00000618500 HYKKA2RU49 373 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 OR2A25A4D2G3 310 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 GOLGA6L4A6NEF3 574 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 AQP7O14520 342 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 ARHGEF9O43307 516 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 HCRTR1O43613 425 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 WDR1O75083 606 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 MTX2O75431 263 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 CRLF1O75462 422 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 NEURL1O76050 574 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 LY6G6DO95868 133 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 FTH1P02794 183 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 CD53P19397 219 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 ACRV1P26436 265 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 EEF1DP29692 281 aaKnown RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 ASCL1P50553 236 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 MSLNQ13421 630 aaPredicted RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 FAM53BQ14153 422 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 OR1C1Q15619 314 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 SLC1A5Q15758 541 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 PPP2R5EQ16537 467 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 CAMK4Q16566 473 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 MUM1Q2TAK8 710 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 SIRPB2Q5JXA9 342 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 ACER2Q5QJU3 275 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 NIPAL1Q6NVV3 410 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 DAAM2Q86T65 1068 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 ZFP62Q8NB50 900 aaPredicted RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 TFGQ92734 400 aaPredicted RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 DCUN1D1Q96GG9 259 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 SOX17Q9H6I2 414 aaPredicted RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 PLEKHF2Q9H8W4 249 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 UGT1A7Q9HAW7 530 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 ARNT2Q9HBZ2 717 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 TMEM160Q9NX00 188 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 TRHDEQ9UKU6 1024 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 PPT2Q9UMR5 302 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 PPIEQ9UNP9 301 aaKnown RBP4.33□□□□□ -1.72
SNCA-213ENST00000618500 A0A0U1RQJ8 604 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 C5orf60A6NFR6 353 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 USP27XA6NNY8 438 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 HACD1B0YJ81 288 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 EPHB6O15197 1021 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 ALOX12BO75342 701 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 PVRP15151 417 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 CXCR2P25025 360 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 PTPN3P26045 913 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 ADRA1AP35348 466 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 PTGS2P35354 604 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 NUP107P57740 925 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 TCEAL1Q15170 157 aa4.33□□□□□ -1.72
SNCA-213ENST00000618500 TEX44Q53QW1 395 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms