RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 EPHX1P07099 455 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 HOXA9P31269 272 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 CYP4F3Q08477 520 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 DOC2AQ14183 400 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 GBX1Q14549 363 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 PCM1Q15154 2024 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 ENPP6Q6UWR7 440 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 GALNT10Q86SR1 603 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 MSRB3Q8IXL7 192 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 DPP10Q8N608 796 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 OR7A2PQ8NGA2 310 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 ZNF597Q96LX8 424 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 OR4K3Q96R72 315 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 C19orf43Q9BQ61 176 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 ACAT2Q9BWD1 397 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 STOX2Q9P2F5 926 aaPredicted RBP12.05□□□□□ -0.48
CIITA-212ENST00000618207 PPT2Q9UMR5 302 aa12.05□□□□□ -0.48
CIITA-212ENST00000618207 ALPK3Q96L96 1907 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 SAP18O00422 153 aaKnown RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 SMIM18P0DKX4 95 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 C6P13671 934 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 HNMTP50135 292 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 CDH15P55291 814 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 AASDHQ4L235 1098 aaPredicted RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 TMPRSS11BQ86T26 416 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 LEMD2Q8NC56 503 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 PKP4Q99569 1192 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 CCM2Q9BSQ5 444 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 CLMPQ9H6B4 373 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 CARS2Q9HA77 564 aaKnown RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 GULP1Q9UBP9 304 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 ADGRE2Q9UHX3 823 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 FBXO10Q9UK96 956 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 PLAGL1Q9UM63 463 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 TRIOO75962 3097 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 ARNTLO00327 626 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 KPNA5O15131 536 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 SPINT1O43278 529 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 SLCO2B1O94956 709 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 CPSF4O95639 269 aaKnown RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 CATP04040 527 aaKnown RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 MPC1LP0DKB6 136 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 BMP2P12643 396 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 HTR1EP28566 365 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 CASP9P55211 416 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 NFE2L1Q14494 772 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 LDLRAP1Q5SW96 308 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 C9orf64Q5T6V5 341 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 TANGO2Q6ICL3 276 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 PDE12Q6L8Q7 609 aaKnown RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 TBPL2Q6SJ96 375 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 PTRH1Q86Y79 214 aaKnown RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 SYT12Q8IV01 421 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 CLEC4FQ8N1N0 589 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 OR8D1Q8WZ84 308 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 FAM162AQ96A26 154 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 NMD3Q96D46 503 aaKnown RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 DUS3LQ96G46 650 aaKnown RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 CENPNQ96H22 339 aaPredicted RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 FBXL20Q96IG2 436 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 UHRF1Q96T88 793 aaPredicted RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 SLC29A3Q9BZD2 475 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 SGK2Q9HBY8 427 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 DYRK4Q9NR20 520 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 SMOXQ9NWM0 555 aa12.04□□□□□ -0.48
CIITA-212ENST00000618207 PCYT1BQ9Y5K3 369 aaPredicted RBP12.04□□□□□ -0.48
CIITA-212ENST00000618207 KCNE1BA0A087WTH5 132 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 MAGEB17A8MXT2 336 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 TNFAIP8O95379 198 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 ETHE1O95571 254 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 PRNPP04156 253 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 GSTM1P09488 218 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 IMPA1P29218 277 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 HSPA13P48723 471 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 CCT8P50990 548 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 AP1S2P56377 157 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 GSTM4Q03013 218 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 CATSPEREQ5SY80 951 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 NOXRED1Q6NXP6 359 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 CHERPQ8IWX8 916 aaKnown RBP12.03□□□□□ -0.48
CIITA-212ENST00000618207 HS3ST5Q8IZT8 346 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 ANKFN1Q8N957 763 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 PLA2G15Q8NCC3 412 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 KLK6Q92876 244 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 NUS1Q96E22 293 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 DTD2Q96FN9 168 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 ASB16Q96NS5 453 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 SAMD11Q96NU1 681 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 IL17FQ96PD4 163 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 OSBPL11Q9BXB4 747 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 THEGQ9P2T0 379 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 SCAMP1O15126 338 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 LDLRP01130 860 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 IL6P05231 212 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 TFAP2AP05549 437 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 GPIP06744 558 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 SRPRAP08240 638 aaKnown RBP12.03□□□□□ -0.48
CIITA-212ENST00000618207 ADRB3P13945 408 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 IL12RB1P42701 662 aa12.03□□□□□ -0.48
CIITA-212ENST00000618207 MRPL19P49406 292 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms