RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 MIPP30301 263 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 DLX2Q07687 328 aaPredicted RBP12.37□□□□□ -0.43
TCF4-248ENST00000616053 TUSC3Q13454 348 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 SLC35F1Q5T1Q4 408 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 C3P1Q6ZMU1 363 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 THAP6Q8TBB0 222 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 C1orf21Q9H246 121 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 ZNF701Q9NV72 531 aaPredicted RBP12.37□□□□□ -0.43
TCF4-248ENST00000616053 B3GNT2Q9NY97 397 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 MAN2B2Q9Y2E5 1009 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 PI15O43692 258 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 MAGEA11P43364 429 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 PNLIPRP1P54315 467 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 CRADDP78560 199 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 TMEM201Q5SNT2 666 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 UNC5AQ6ZN44 842 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 USP49Q70CQ1 688 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 TEX19Q8NA77 164 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 OR14L1PQ8NHC6 308 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 GCM1Q9NP62 436 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 C8GP07360 202 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 ATF6P18850 670 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 C3orf38Q5JPI3 329 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 LRRC73Q5JTD7 316 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 SV2AQ7L0J3 742 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 VTCN1Q7Z7D3 282 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 ANKS1AQ92625 1134 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 GPATCH1Q9BRR8 931 aaKnown RBP12.37□□□□□ -0.43
TCF4-248ENST00000616053 CFHP08603 1231 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 RBL1P28749 1068 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 ASB15Q8WXK1 588 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 MUCL1Q96DR8 90 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 SPAG4Q9NPE6 437 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 WNT10BO00744 389 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 FADS2O95864 444 aaKnown RBP12.37□□□□□ -0.43
TCF4-248ENST00000616053 KLK7P49862 253 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 PTENP60484 403 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 PARP15Q460N3 678 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 CHRFAM7AQ494W8 412 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 FAM69BQ5VUD6 431 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 NXPE1Q8N323 547 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 MREGQ8N565 214 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 YIPF4Q9BSR8 244 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 USP31Q70CQ4 1352 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 AP5Z1O43299 807 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 PRAMEF1O95521 474 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 GRIN2CQ14957 1233 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 FAM214AQ32MH5 1076 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 OR4E2Q8NGC2 313 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 WDR12Q9GZL7 423 aaKnown RBP12.36□□□□□ -0.43
TCF4-248ENST00000616053 PDP1Q9P0J1 537 aaPredicted RBP12.36□□□□□ -0.43
TCF4-248ENST00000616053 PRORSD1PA6NEY8 169 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 MAP2K7O14733 419 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 PAGE1O75459 146 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 SLC22A3O75751 556 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 ATP4AP20648 1035 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 LEPRP48357 1165 aaKnown RBP12.36□□□□□ -0.43
TCF4-248ENST00000616053 ACADVLP49748 655 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 PCBP2Q15366 365 aaKnown RBP eCLIP12.36□□□□□ -0.43
TCF4-248ENST00000616053 VSTM1Q6UX27 236 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 CELF5Q8N6W0 485 aaKnown RBP12.36□□□□□ -0.43
TCF4-248ENST00000616053 PSD4Q8NDX1 1056 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 DCLRE1BQ9H816 532 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 EVPLQ92817 2033 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 PRAMEF33A0A0G2JMD5 474 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 hCG_1809904A0A1W2PP81 198 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 A0A1W2PPE2 198 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 A0A1W2PR64 198 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 A0A1W2PRV1 198 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 TGM5O43548 720 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 ENSAO43768 121 aaKnown RBP12.36□□□□□ -0.43
TCF4-248ENST00000616053 PRAMEF10O60809 474 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 MTHFD2P13995 350 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 SREBF1P36956 1147 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 RTP1P59025 263 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 IRF5Q13568 498 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 DSC3Q14574 896 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 ARL10Q8N8L6 244 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 OR4K2Q8NGD2 314 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 NPLOC4Q8TAT6 608 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.36□□□□□ -0.439e-7■■■□□ 17.1
TCF4-248ENST00000616053 COG8Q96MW5 612 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 ZNF570Q96NI8 536 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 GINS3Q9BRX5 216 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 COQ3Q9NZJ6 369 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 A0A0A0MRY4 1105 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 ZNF670-ZNF695F2Z2N8 137 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 SLC1A7O00341 560 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 FOXN1O15353 648 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 STK16O75716 305 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 CD3GP09693 182 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 APLNRP35414 380 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 RFWD3Q6PCD5 774 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 SGCZQ96LD1 299 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 SPATA13Q96N96 652 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 RAB36O95755 333 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 RALGPS1Q5JS13 557 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 TMEM63BQ5T3F8 832 aa12.36□□□□□ -0.43
TCF4-248ENST00000616053 KYAT3Q6YP21 454 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms