RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 OR4F6Q8NGB9 312 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 VANGL1Q8TAA9 524 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 DGAT2Q96PD7 388 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 SYT11Q9BT88 431 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 RNF38Q9H0F5 515 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 SLITRK2Q9H156 845 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 RMI1Q9H9A7 625 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 RIMKLBQ9ULI2 386 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 LRCH1Q9Y2L9 728 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 MYO9BQ13459 2157 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 FAM170BA6NMN3 283 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 BHMG1C9JSJ3 638 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 H3BNC9 293 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 OR1I1O60431 355 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 IFNW1P05000 195 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 F7P08709 466 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 POLR2CP19387 275 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 FEN1P39748 380 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 CASRP41180 1078 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 BTN3A2P78410 334 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 HMGCS1Q01581 520 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 DLG1Q12959 904 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 ANKRD46Q86W74 232 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 MFSD6LQ8IWD5 586 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 C1orf52Q8N6N3 182 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 RORBQ92753 470 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 ARMC5Q96C12 935 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 C5orf34Q96MH7 638 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 SMAD5Q99717 465 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 IKZF3Q9UKT9 509 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 LY75O60449 1722 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 ABLIM3O94929 683 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 AGR2O95994 175 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 CXCL12P48061 93 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 HKDC1Q2TB90 917 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 FAM214AQ32MH5 1076 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 ACSBG2Q5FVE4 666 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 CRTC1Q6UUV9 634 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 FAM92BQ6ZTR7 304 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 RANBP3LQ86VV4 465 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 FCRL3Q96P31 734 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 PRORSD1PA6NEY8 169 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 DUX1O43812 170 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 S1PR4O95977 384 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 BPIP17213 487 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 TMED10P49755 219 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 ABATP80404 500 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 MRPS21P82921 87 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 MTX3Q5HYI7 312 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 FAM220AQ7Z4H9 259 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 KCNN1Q92952 543 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 MYRFLQ96LU7 910 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 ZNF184Q99676 751 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 CPEB1Q9BZB8 566 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 ADAP2Q9NPF8 381 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 ZCCHC3Q9NUD5 404 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 C19orf25Q9UFG5 118 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 ADAM30Q9UKF2 790 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 PLAGL1Q9UM63 463 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 PSAT1Q9Y617 370 aa9.2□□□□□ -0.94
CLTCL1-208ENST00000615606 PEX12O00623 359 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 KLK1P06870 262 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 JMJD7P0C870 316 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 THEGLP0DJG4 465 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 CCKBRP32239 447 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 PIK3CBP42338 1070 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 CSNK1DP48730 415 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 WDR4P57081 412 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 ADAM17P78536 824 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 EIPR1Q53HC9 387 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 CBARPQ8N350 705 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 OR2T34Q8NGX1 318 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 GPR151Q8TDV0 419 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 MSANTD3Q96H12 275 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 ALG2Q9H553 416 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 CNOT6Q9ULM6 557 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 SSC5DA1L4H1 1573 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 KIAA0100Q14667 2235 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 TRIM43BA6NCK2 446 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 KLF11O14901 512 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 F11P03951 625 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 TSPAN19P0C672 248 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 SEPHS1P49903 392 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 GALK1P51570 392 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 DNAJB13P59910 316 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 KCNJ2P63252 427 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 NRF1Q16656 503 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 PTCRAQ6ISU1 281 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 RANBP10Q6VN20 620 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 ZNF730Q6ZMV8 503 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 RTL4Q6ZR62 310 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 TP53INP2Q8IXH6 220 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 CADM2Q8N3J6 435 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 TMIEQ8NEW7 156 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 TRIM43Q96BQ3 446 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 HERPUD2Q9BSE4 406 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 C8orf4Q9NR00 106 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 PNO1Q9NRX1 252 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 ZIM2Q9NZV7 527 aa9.19□□□□□ -0.94
CLTCL1-208ENST00000615606 COQ9O75208 318 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms