RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 CUZD1Q86UP6 607 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 NLGN4XQ8N0W4 816 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 FBXO39Q8N4B4 442 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 ZBTB2Q8N680 514 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 STON2Q8WXE9 905 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 OR8D1Q8WZ84 308 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 ULK4Q96C45 1275 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 KLHL29Q96CT2 875 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 MSLNLQ96KJ4 702 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 ACOX2Q99424 681 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 COPS8Q99627 209 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 ERVK-6Q9BXR3 956 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 ABCG8Q9H221 673 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 LRMDAQ9H2I8 198 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 FAM83DQ9H4H8 585 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 WDR55Q9H6Y2 383 aaPredicted RBP8.24□□□□□ -1.09
CCL3-205ENST00000613928 FBRSL1Q9HCM7 1045 aaKnown RBP8.24□□□□□ -1.09
CCL3-205ENST00000613928 SLC40A1Q9NP59 571 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 ZDHHC4Q9NPG8 344 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 PRSS16Q9NQE7 514 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 ARHGEF3Q9NR81 526 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 SMOXQ9NWM0 555 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 MYOTQ9UBF9 498 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 LNPEPQ9UIQ6 1025 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 ITM2BQ9Y287 266 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 SIT1Q9Y3P8 196 aa8.24□□□□□ -1.09
CCL3-205ENST00000613928 PLXNA2O75051 1894 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 PTPRZ1P23471 2315 aaPredicted RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 GOLGA8QA0A0J9YX86 632 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 CCDC189A1A4V9 331 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 RGSL1A5PLK6 1076 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 GOLGA8OA6NCC3 632 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 LOC730098B7Z3J9 87 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 GOLGA8NF8WBI6 632 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 STX16-NPEPL1H3BU86 382 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 PLK4O00444 970 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 SDHDO14521 159 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 STX16O14662 325 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 AREL1O15033 823 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 SGTAO43765 313 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 RASSF9O75901 435 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 KAT7O95251 611 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 PDGFBP01127 241 aaPredicted RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 AMY2AP04746 511 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 RPS17P08708 135 aaKnown RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 GFAPP14136 432 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 AMY2BP19961 511 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 NFKBIAP25963 317 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 PTPN4P29074 926 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 AVPR2P30518 371 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 MTHFRP42898 656 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 YBX1P67809 324 aaKnown RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 PFKFB4Q16877 469 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 LSM12Q3MHD2 195 aaKnown RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 ITPRIPL2Q3MIP1 535 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 PLEKHN1Q494U1 663 aaPredicted RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 KHDC1Q4VXA5 237 aaKnown RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 FBXO48Q5FWF7 155 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 SH2D4BQ5SQS7 431 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 HENMT1Q5T8I9 393 aaKnown RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 ERAP2Q6P179 960 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 ZC3H14Q6PJT7 736 aaKnown RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 SBSNQ6UWP8 590 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 SERPINA13PQ6UXR4 307 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 RINLQ6ZS11 566 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 ASCL5Q7RTU5 278 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 MILR1Q7Z6M3 343 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 TRIM48Q8IWZ4 208 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 AFAP1L2Q8N4X5 818 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 TRAM1L1Q8N609 369 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 SMRP1Q8NCR6 262 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 UCMAQ8WVF2 138 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 MAELQ96JY0 434 aaKnown RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 PPP1R36Q96LQ0 422 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 COQ10AQ96MF6 247 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 RIPOR3Q96MK2 946 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 TRMOQ9BU70 441 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 TUBB6Q9BUF5 446 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 CCDC28BQ9BUN5 200 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 RIOK2Q9BVS4 552 aaKnown RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 SPATA16Q9BXB7 569 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 C1QTNF3Q9BXJ4 246 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 NUF2Q9BZD4 464 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 ZNF385DQ9H6B1 395 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 EML4Q9HC35 981 aaKnown RBP8.23□□□□□ -1.09
CCL3-205ENST00000613928 SMURF1Q9HCE7 757 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 SUN2Q9UH99 717 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 SRPK3Q9UPE1 567 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 SORCS3Q9UPU3 1222 aa8.23□□□□□ -1.09
CCL3-205ENST00000613928 hCG_2014768A0A024R1R8 64 aa8.22□□□□□ -1.09
CCL3-205ENST00000613928 PRR23AA6NEV1 266 aa8.22□□□□□ -1.09
CCL3-205ENST00000613928 NCF1BA6NI72 391 aaPredicted RBP8.22□□□□□ -1.09
CCL3-205ENST00000613928 SYCE1LA8MT33 242 aa8.22□□□□□ -1.09
CCL3-205ENST00000613928 NCF1CA8MVU1 366 aaPredicted RBP8.22□□□□□ -1.09
CCL3-205ENST00000613928 E9PBE3 544 aa8.22□□□□□ -1.09
CCL3-205ENST00000613928 H0YHG0 523 aa8.22□□□□□ -1.09
CCL3-205ENST00000613928 PSMD11O00231 422 aa8.22□□□□□ -1.09
CCL3-205ENST00000613928 NEMP1O14524 444 aa8.22□□□□□ -1.09
CCL3-205ENST00000613928 KLHL41O60662 606 aa8.22□□□□□ -1.09
CCL3-205ENST00000613928 HNRNPCL1O60812 293 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms