RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 COMMD10Q9Y6G5 202 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 COLEC10Q9Y6Z7 277 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 SPEGQ15772 3267 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 COL27A1Q8IZC6 1860 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 IGHV1OR21-1A0A087WYE8 117 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 IQCF5A8MTL0 148 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 B2RBV5 119 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 D6RAR5 112 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 TMX2-CTNND1H3BSU7 103 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 TK2O00142 265 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 DLX3O60479 287 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 GPC4O75487 556 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 SNUPNO95149 360 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 WISP3O95389 354 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 CPNE6O95741 557 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ENO1P06733 434 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 MTHFD1P11586 935 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 PKMP14618 531 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 EZRP15311 586 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ITGB6P18564 788 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 SAT1P21673 171 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 AOAHP28039 575 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 PDHA2P29803 388 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 CCR7P32248 378 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 KPNA2P52292 529 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 RAP1GDS1P52306 607 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 DNAJB13P59910 316 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 DLG1Q12959 904 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 BOP1Q14137 746 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 UBAP2LQ14157 1087 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 RCN2Q14257 317 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ZNF460Q14592 562 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 AMZ1Q400G9 498 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ZNF789Q5FWF6 425 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 CTSL3PQ5NE16 218 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 METTL21CQ5VZV1 264 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 PDZD3Q86UT5 571 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ZNF781Q8N8C0 355 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 OR10G6Q8NH81 332 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 NXNL1Q96CM4 212 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 TSPAN17Q96FV3 270 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 AHCYL2Q96HN2 611 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ELMO2Q96JJ3 720 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 MRPL57Q9BQC6 102 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ILKAPQ9H0C8 392 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 MRPL46Q9H2W6 279 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 SYNDIG1Q9H7V2 258 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 LATS2Q9NRM7 1088 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 IGSF5Q9NSI5 407 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 IMP3Q9NV31 184 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 NOP53Q9NZM5 478 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 KLK13Q9UKR3 277 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 MSRB2Q9Y3D2 182 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 RAP2CQ9Y3L5 183 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 L3MBTL1Q9Y468 752 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ACACAQ13085 2346 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 E5RI56 91 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 SLCO1B7G3V0H7 640 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 MATN2O00339 956 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 DUX1O43812 170 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 SLCO2B1O94956 709 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 ANP32DO95626 131 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 GNAZP19086 355 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 CHRM3P20309 590 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 CD1CP29017 333 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 CPOXP36551 454 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 SERPINB5P36952 375 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 SLC26A3P40879 764 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 PREPP48147 710 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 PGGT1BP53609 377 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 HSPA14Q0VDF9 509 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 ASPHQ12797 758 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 TARDBPQ13148 414 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMAD4-217ENST00000611848 KRT33BQ14525 404 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 ISXQ2M1V0 245 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 DNAL1Q4LDG9 190 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 PLEKHS1Q5SXH7 462 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 VWA5B1Q5TIE3 1220 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 PIM3Q86V86 326 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 ZNF761Q86XN6 746 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-217ENST00000611848 SLC22A15Q8IZD6 547 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 LSMEM2Q8N112 164 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 ARHGAP24Q8N264 748 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 GPATCH11Q8N954 259 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 RBM15BQ8NDT2 890 aaKnown RBP8.57□□□□□ -1.04
SMAD4-217ENST00000611848 LKAAEAR1Q8TD35 194 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 TFGQ92734 400 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-217ENST00000611848 KCNJ9Q92806 393 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 MCUR1Q96AQ8 359 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 SCYL1Q96KG9 808 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 UBXN10Q96LJ8 280 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 TMEM74Q96NL1 305 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 OLFM1Q99784 485 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 MVB12BQ9H7P6 319 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 KLHL42Q9P2K6 505 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 XPR1Q9UBH6 696 aa8.57□□□□□ -1.04
SMAD4-217ENST00000611848 NKX1-2Q9UD57 310 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-217ENST00000611848 CFAP20Q9Y6A4 193 aaKnown RBP8.57□□□□□ -1.04
SMAD4-217ENST00000611848 ANKRD12Q6UB98 2062 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms