RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SPARTQ8N0X7 666 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 ARL10Q8N8L6 244 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 BPIFB6Q8NFQ5 453 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 MCOLN3Q8TDD5 553 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 FRS2Q8WU20 508 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 SNX19Q92543 992 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 SGCDQ92629 289 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 EGLN2Q96KS0 407 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 LHPPQ9H008 270 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 BRD9Q9H8M2 597 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 DNAJC11Q9NVH1 559 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 PCDH10Q9P2E7 1040 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 MAFFQ9ULX9 164 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 KRT87PA6NCN2 255 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 EVPLLA8MZ36 301 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 ZNF682O95780 498 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 LRG1P02750 347 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 ATP1B2P14415 290 aaPredicted RBP16.75■□□□□ 0.27
NEK3-206ENST00000611833 HOXB6P17509 224 aaKnown RBP16.75■□□□□ 0.27
NEK3-206ENST00000611833 CD247P20963 164 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 GSTM2P28161 218 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 SLC6A12P48065 614 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 SPINT3P49223 89 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 FRG2Q64ET8 278 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 OR4F3Q6IEY1 312 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 L3MBTL4Q8NA19 623 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 MAGED4Q96JG8 741 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 FRG2BQ96QU4 278 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 P2RY13Q9BPV8 354 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 ATG10Q9H0Y0 220 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.75■□□□□ 0.27
NEK3-206ENST00000611833 B4GALT6Q9UBX8 382 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 SLCO3A1Q9UIG8 710 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 SLC25A13Q9UJS0 675 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 TBX21Q9UL17 535 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 CCL26Q9Y258 94 aa16.75■□□□□ 0.27
NEK3-206ENST00000611833 LTBP2Q14767 1821 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 MTX2O75431 263 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 POP4O95707 220 aaKnown RBP16.74■□□□□ 0.27
NEK3-206ENST00000611833 MPC1LP0DKB6 136 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 IL1RNP18510 177 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 PRPH2P23942 346 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 RAD23AP54725 363 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 CD47Q08722 323 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 BNIP3Q12983 259 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 GBX1Q14549 363 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 ARHGEF6Q15052 776 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 CARD16Q5EG05 197 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 ELMSAN1Q6PJG2 1045 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 CYP2U1Q7Z449 544 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 FNDC8Q8TC99 324 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 CPEB1Q9BZB8 566 aaKnown RBP16.74■□□□□ 0.27
NEK3-206ENST00000611833 RNF208Q9H0X6 261 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 ZNF182P17025 639 aaPredicted RBP16.74■□□□□ 0.27
NEK3-206ENST00000611833 AMD1P17707 334 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 PFKLP17858 780 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 PTPN6P29350 595 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 KIR3DL1P43629 444 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 NFATC3Q12968 1075 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 CHIT1Q13231 466 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 TOP3AQ13472 1001 aaPredicted RBP16.74■□□□□ 0.27
NEK3-206ENST00000611833 CTU2Q2VPK5 515 aaKnown RBP16.74■□□□□ 0.27
NEK3-206ENST00000611833 PLEKHS1Q5SXH7 462 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 NOXRED1Q6NXP6 359 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 XKR5Q6UX68 686 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 ZDHHC21Q8IVQ6 265 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 CHST14Q8NCH0 376 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 TBC1D15Q8TC07 691 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 NELL1Q92832 810 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 TOX2Q96NM4 488 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 EBPLQ9BY08 206 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 RHBDL2Q9NX52 303 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 SAMD4AQ9UPU9 718 aaKnown RBP16.74■□□□□ 0.27
NEK3-206ENST00000611833 SNX5Q9Y5X3 404 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 GMEB1Q9Y692 573 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 DOCK6Q96HP0 2047 aa16.74■□□□□ 0.27
NEK3-206ENST00000611833 SH3PXD2BA1X283 911 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 TRIM64BA6NI03 449 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 GRM6O15303 877 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 CCNDBP1O95273 360 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 AGXTP21549 392 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 GABARAPL2P60520 117 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 SP140Q13342 867 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 RFX4Q33E94 735 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 ANKRD26P1Q6NSI1 321 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 SERPINA13PQ6UXR4 307 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 Q6ZVU0 165 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 RBM23Q86U06 439 aaKnown RBP16.73■□□□□ 0.27
NEK3-206ENST00000611833 TMEM25Q86YD3 366 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 DCP2Q8IU60 420 aaKnown RBP16.73■□□□□ 0.27
NEK3-206ENST00000611833 ZC3H7AQ8IWR0 971 aaKnown RBP16.73■□□□□ 0.27
NEK3-206ENST00000611833 RNF175Q8N4F7 328 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 CSGALNACT1Q8TDX6 532 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 RAB2BQ8WUD1 216 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 ZNF641Q96N77 438 aaPredicted RBP16.73■□□□□ 0.27
NEK3-206ENST00000611833 EMILIN2Q9BXX0 1053 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 THG1LQ9NWX6 298 aaKnown RBP16.73■□□□□ 0.27
NEK3-206ENST00000611833 WARS2Q9UGM6 360 aaKnown RBP16.73■□□□□ 0.27
NEK3-206ENST00000611833 ABHD14A-ACY1A0A1B0GW23 586 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 PTGES3LE9PB15 166 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms