RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 DCTN3O75935 186 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 ANXA6P08133 673 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 NPPBP16860 134 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 NUBP1P53384 320 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 INHBCP55103 352 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 UBE2IP63279 158 aaKnown RBP21.84■■□□□ 1.09
IRF3-228ENST00000601291 PCDH1Q08174 1060 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 PLCL1Q15111 1095 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 XKR6Q5GH73 641 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 LIPJQ5W064 366 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 DDIASQ8IXT1 998 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 RBM12BQ8IXT5 1001 aaKnown RBP21.84■■□□□ 1.09
IRF3-228ENST00000601291 C2orf73Q8N5S3 287 aaPredicted RBP21.84■■□□□ 1.09
IRF3-228ENST00000601291 LMNTD1Q8N9Z9 388 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 L3MBTL4Q8NA19 623 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 CEP76Q8TAP6 659 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 PATE1Q8WXA2 126 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 C19orf60Q96EN9 201 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 PPP1R36Q96LQ0 422 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 ELF4Q99607 663 aaPredicted RBP21.84■■□□□ 1.09
IRF3-228ENST00000601291 MEAF6Q9HAF1 191 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 RNF11Q9Y3C5 154 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 FANCMQ8IYD8 2048 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 ZDBF2Q9HCK1 2354 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 YY2O15391 372 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 SDC3O75056 442 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 JUNP05412 331 aaKnown RBP21.83■■□□□ 1.09
IRF3-228ENST00000601291 SERPINB3P29508 390 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 DUOXA1Q1HG43 343 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 SLC9B1Q4ZJI4 515 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 AMIGO1Q86WK6 493 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 LINC01555Q8NAE3 123 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 CCT6BQ92526 530 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 CCT7Q99832 543 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 TCF7L2Q9NQB0 619 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 OR6C2Q9NZP2 312 aa21.83■■□□□ 1.09
IRF3-228ENST00000601291 KMT2EQ8IZD2 1858 aa21.83■■□□□ 1.08
IRF3-228ENST00000601291 EBAG9O00559 213 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 PIP5K1BO14986 540 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 GALR2O43603 387 aaPredicted RBP21.82■■□□□ 1.08
IRF3-228ENST00000601291 CFIP05156 583 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 TMPRSS11BQ86T26 416 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 SLC5A11Q8WWX8 675 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 NEIL2Q969S2 332 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 SRMSQ9H3Y6 488 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 HEY2Q9UBP5 337 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 TAC3Q9UHF0 121 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 CSNK1G3Q9Y6M4 447 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 SPAG17Q6Q759 2223 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 KRT6AP02538 564 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 KRT6BP04259 564 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 JUPP14923 745 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 EPHA3P29320 983 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 HNF4AP41235 474 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 RXRGP48443 463 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 KRT6CP48668 564 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 BNC1Q01954 994 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 HHEXQ03014 270 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 GPR18Q14330 331 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 TBCCQ15814 346 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 C17orf64Q86WR6 236 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 PTCD3Q96EY7 689 aaKnown RBP21.82■■□□□ 1.08
IRF3-228ENST00000601291 MAELQ96JY0 434 aaKnown RBP21.82■■□□□ 1.08
IRF3-228ENST00000601291 NRTNQ99748 197 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 EHD1Q9H4M9 534 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 SNX6Q9UNH7 406 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 BTRCQ9Y297 605 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 PCDHB11Q9Y5F2 797 aa21.82■■□□□ 1.08
IRF3-228ENST00000601291 MUC3AQ02505 3323 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 GOLGA8QA0A0J9YX86 632 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 A0A1W2PPV9 198 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 GOLGA8OA6NCC3 632 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 PRR33A8MZF0 331 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 GOLGA8NF8WBI6 632 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 SDHDO14521 159 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 FFAR3O14843 346 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 GPR42O15529 346 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 WFS1O76024 890 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 DOC2AQ14183 400 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 CPSF6Q16630 551 aaKnown RBP eCLIP21.81■■□□□ 1.08
IRF3-228ENST00000601291 DEFB133Q30KQ1 61 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 GRHL2Q6ISB3 625 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 OR4E2Q8NGC2 313 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 JPH3Q8WXH2 748 aaPredicted RBP21.81■■□□□ 1.08
IRF3-228ENST00000601291 CCDC28BQ9BUN5 200 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 EFCAB11Q9BUY7 163 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 ACAT2Q9BWD1 397 aa21.81■■□□□ 1.08
IRF3-228ENST00000601291 WDR55Q9H6Y2 383 aaPredicted RBP21.81■■□□□ 1.08
IRF3-228ENST00000601291 TP53BP1Q12888 1972 aaPredicted RBP21.8■■□□□ 1.08
IRF3-228ENST00000601291 FAM221BA6H8Z2 402 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 VPS4BO75351 444 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 ULK1O75385 1050 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 CASP2P42575 452 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 GRIK2Q13002 908 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 BIRC2Q13490 618 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 PAGE2BQ5JRK9 111 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 ATG9BQ674R7 924 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 NXNQ6DKJ4 435 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 IL27RAQ6UWB1 636 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 SLCO4C1Q6ZQN7 724 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms