RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 MIPEPQ99797 713 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 NUDT9Q9BW91 350 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 WDR54Q9H977 334 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 FAM114A2Q9NRY5 505 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 SLC22A11Q9NSA0 550 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 CUTCQ9NTM9 273 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 ZCWPW2A0A1B0GU75 182 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 A0A1W2PPV9 198 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 A6NL46 340 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 ZNF839A8K0R7 811 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 CES2O00748 559 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 CNOT3O75175 753 aaKnown RBP15.14■□□□□ 0.01
VRK3-221ENST00000600284 USP1O94782 785 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 SORBS2O94875 1100 aaKnown RBP15.14■□□□□ 0.01
VRK3-221ENST00000600284 CATP04040 527 aaKnown RBP15.14■□□□□ 0.01
VRK3-221ENST00000600284 UMODP07911 640 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 VARSP26640 1264 aaKnown RBP15.14■□□□□ 0.01
VRK3-221ENST00000600284 CMPK1P30085 196 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 FNTAP49354 379 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 CLCN7P51798 805 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 SLC9A5Q14940 896 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 KLHL38Q2WGJ6 581 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 TTLL9Q3SXZ7 439 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 NADK2Q4G0N4 442 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 VWA5B1Q5TIE3 1220 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 EFCAB3Q8N7B9 438 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 NAT8LQ8N9F0 302 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 FBXO15Q8NCQ5 510 aaPredicted RBP15.14■□□□□ 0.01
VRK3-221ENST00000600284 CPT1CQ8TCG5 803 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 KCNJ9Q92806 393 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 ZNF669Q96BR6 464 aaPredicted RBP15.14■□□□□ 0.01
VRK3-221ENST00000600284 P4HTMQ9NXG6 502 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 ANKMY1Q9P2S6 941 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 NXT1Q9UKK6 140 aaKnown RBP15.14■□□□□ 0.01
VRK3-221ENST00000600284 RUVBL2Q9Y230 463 aaKnown RBP15.14■□□□□ 0.01
VRK3-221ENST00000600284 COMMD10Q9Y6G5 202 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 FAM169AQ9Y6X4 670 aa15.14■□□□□ 0.01
VRK3-221ENST00000600284 SNRNP200O75643 2136 aaKnown RBP15.14■□□□□ 0.01
VRK3-221ENST00000600284 GOLGA6L10A0A0M3HER8 536 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 OR2A25A4D2G3 310 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 CTAGE9A4FU28 777 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 AGPSO00116 658 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 MYO1CO00159 1063 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 ZSCAN12O43309 604 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 CTSVO60911 334 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 PHF2O75151 1096 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 VPS4BO75351 444 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 ITGAXP20702 1163 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 MMP11P24347 488 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 PSMB5P28074 263 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 MYBPC3Q14896 1274 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 LONRF1Q17RB8 773 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 KCTD19Q17RG1 926 aaPredicted RBP15.13■□□□□ 0.01
VRK3-221ENST00000600284 ACSBG2Q5FVE4 666 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 WASHC2DQ5SRD0 308 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 ZNF470Q6ECI4 717 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 JMJD6Q6NYC1 403 aaPredicted RBP15.13■□□□□ 0.01
VRK3-221ENST00000600284 RNF44Q7L0R7 432 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 REXO1L1PQ8IX06 675 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 GALNT16Q8N428 558 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 GALNT11Q8NCW6 608 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 SMPDL3AQ92484 453 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 OSBPL9Q96SU4 736 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 CCDC68Q9H2F9 335 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 ATP13A2Q9NQ11 1180 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 GALPQ9UBC7 116 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 VPS4AQ9UN37 437 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 MAP4K5Q9Y4K4 846 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 FER1L5A0AVI2 2057 aa15.13■□□□□ 0.01
VRK3-221ENST00000600284 SPENQ96T58 3664 aaKnown RBP15.13■□□□□ 0.01
VRK3-221ENST00000600284 ARHGEF33A8MVX0 844 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 GOLGA8MH3BSY2 632 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 IPO13O94829 963 aaKnown RBP15.12■□□□□ 0.01
VRK3-221ENST00000600284 ALPPP05187 535 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 MPC1LP0DKB6 136 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 ENO3P13929 434 aaPredicted RBP15.12■□□□□ 0.01
VRK3-221ENST00000600284 MCM3P25205 808 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 EMP3P54852 163 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 VSX2P58304 361 aaPredicted RBP15.12■□□□□ 0.01
VRK3-221ENST00000600284 RELAQ04206 551 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 FASTKQ14296 549 aaKnown RBP15.12■□□□□ 0.01
VRK3-221ENST00000600284 NKG7Q16617 165 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.12■□□□□ 0.01
VRK3-221ENST00000600284 PRMT9Q6P2P2 845 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 IGFL3Q6UXB1 125 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 PPP1R32Q7Z5V6 425 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 PPIL6Q8IXY8 311 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 FAM26EQ8N5C1 309 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 RBMXL3Q8N7X1 1067 aaKnown RBP15.12■□□□□ 0.01
VRK3-221ENST00000600284 COG1Q8WTW3 980 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 PNPLA2Q96AD5 504 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 FAM136AQ96C01 138 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 VPS50Q96JG6 964 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 SIGLEC10Q96LC7 697 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 ZFYVE21Q9BQ24 234 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 TRIM56Q9BRZ2 755 aaKnown RBP15.12■□□□□ 0.01
VRK3-221ENST00000600284 DPH7Q9BTV6 452 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 UTP6Q9NYH9 597 aaKnown RBP15.12■□□□□ 0.01
VRK3-221ENST00000600284 DHRS7Q9Y394 339 aa15.12■□□□□ 0.01
VRK3-221ENST00000600284 MAD1L1Q9Y6D9 718 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms