RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 HIST1H2AGP0C0S8 130 aaPredicted RBP18.21■□□□□ 0.51
CCDC9-205ENST00000600117 POLR2CP19387 275 aaPredicted RBP18.21■□□□□ 0.51
CCDC9-205ENST00000600117 HIST1H2ADP20671 130 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 PNLIPRP1P54315 467 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 GFERP55789 205 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 TAP2Q03519 686 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 KCNC4Q03721 635 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 SPIDRQ14159 915 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 TGFBIQ15582 683 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 WDR74Q6RFH5 385 aaPredicted RBP18.21■□□□□ 0.51
CCDC9-205ENST00000600117 ZNF574Q6ZN55 896 aaPredicted RBP18.21■□□□□ 0.51
CCDC9-205ENST00000600117 HDXQ7Z353 690 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 LCA5Q86VQ0 697 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 GPSM1Q86YR5 675 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 FLVCR1-AS1Q8TAF5 88 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 FBXL8Q96CD0 374 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 PGM2Q96G03 612 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 HIST1H2AHQ96KK5 128 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 HIST1H2AJQ99878 128 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 H2AFJQ9BTM1 129 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 ABCG4Q9H172 646 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 ARL15Q9NXU5 204 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 LNPEPQ9UIQ6 1025 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 RNF112Q9ULX5 631 aa18.21■□□□□ 0.51
CCDC9-205ENST00000600117 B8ZZF3 427 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 CAPN5O15484 640 aaPredicted RBP18.2■□□□□ 0.5
CCDC9-205ENST00000600117 GUCA1CO95843 209 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 GSTA1P08263 222 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 MTHFD2P13995 350 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 KRT4P19013 534 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 HSD17B2P37059 387 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 KPNA2P52292 529 aaKnown RBP18.2■□□□□ 0.5
CCDC9-205ENST00000600117 PDX1P52945 283 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 UCNP55089 124 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 CDKL4Q5MAI5 379 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 KLC3Q6P597 504 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 TMEM71Q6P5X7 295 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 AGTRAPQ6RW13 159 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 CDHR3Q6ZTQ4 885 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 FRA10AC1Q70Z53 315 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 SLITRK4Q8IW52 837 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 C4orf33Q8N1A6 199 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 TMEM151AQ8N4L1 468 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 RAB42Q8N4Z0 105 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 C2orf73Q8N5S3 287 aaPredicted RBP18.2■□□□□ 0.5
CCDC9-205ENST00000600117 DCBLD1Q8N8Z6 715 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 PPFIBP2Q8ND30 876 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 ZNF248Q8NDW4 579 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 OR4D9Q8NGE8 314 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 DPYSL5Q9BPU6 564 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 ACTR10Q9NZ32 417 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 TMEM216Q9P0N5 145 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 PDP2Q9P2J9 529 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 POMT2Q9UKY4 750 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 CLCA2Q9UQC9 943 aa18.2■□□□□ 0.5
CCDC9-205ENST00000600117 TEX15Q9BXT5 2789 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 PIPSLA2A3N6 862 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 RBP1P09455 135 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 SBK3P0C264 359 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 TMPRSS3P57727 454 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 KIR2DS3Q14952 304 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 BROXQ5VW32 411 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 TAX1BP1Q86VP1 789 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 PLXDC1Q8IUK5 500 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 SRRM1Q8IYB3 904 aaKnown RBP18.19■□□□□ 0.5
CCDC9-205ENST00000600117 SYTL1Q8IYJ3 562 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 PDPRQ8NCN5 879 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 SMPDL3AQ92484 453 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 RHBDF1Q96CC6 855 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 TSNARE1Q96NA8 513 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 OR2A14Q96R47 310 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 SEMA4CQ9C0C4 833 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 SEMA6CQ9H3T2 930 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 VIPAS39Q9H9C1 493 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 MKS1Q9NXB0 559 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 XPR1Q9UBH6 696 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 EMCNQ9ULC0 261 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 ENTPD2Q9Y5L3 495 aa18.19■□□□□ 0.5
CCDC9-205ENST00000600117 IGHV5-10-1A0A0J9YXX1 117 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 GSAPA4D1B5 854 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 ZNF839A8K0R7 811 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 C2orf74A8MZ97 194 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 TARM1B6A8C7 271 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 UBXN8O00124 270 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 MATN2O00339 956 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 GLRA3O75311 464 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 SASH3O75995 380 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 MT-CO3P00414 261 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 ANXA5P08758 320 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 CREB1P16220 341 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 UGT2B7P16662 529 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 CRHR1P34998 444 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 LSSP48449 732 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 PPM1FP49593 454 aaPredicted RBP18.18■□□□□ 0.5
CCDC9-205ENST00000600117 PCBP4P57723 403 aaKnown RBP18.18■□□□□ 0.5
CCDC9-205ENST00000600117 ZFP36L1Q07352 338 aaKnown RBP18.18■□□□□ 0.5
CCDC9-205ENST00000600117 PRKAA1Q13131 559 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 ARMC6Q6NXE6 501 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 IRGCQ6NXR0 463 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 C16orf46Q6P387 395 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms