RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 SPRP35270 261 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 GCGRP47871 477 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 DLG1Q12959 904 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 TMEM164Q5U3C3 297 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 PRAMEF17Q5VTA0 474 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 CMC1Q7Z7K0 106 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 PPP1R3BQ86XI6 285 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 SLC38A9Q8NBW4 561 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 KCNE4Q8WWG9 221 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 SLC44A1Q8WWI5 657 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 NKD1Q969G9 470 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 SLC22A18Q96BI1 424 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 CRELD1Q96HD1 420 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 DCBLD2Q96PD2 775 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 CYTH2Q99418 400 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 PDE7BQ9NP56 450 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 SOHLH2Q9NX45 425 aa18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 NOVA2Q9UNW9 492 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-221ENST00000599833 STMND1H3BQB6 276 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 TERTO14746 1132 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 FKBP9O95302 570 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 ABHD2P08910 425 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 SLC35E2BP0CK96 405 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 PHBP35232 272 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 HSD17B2P37059 387 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 USP10Q14694 798 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 NKAPQ8N5F7 415 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 SMPDL3AQ92484 453 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 ISL2Q96A47 359 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 TCTN2Q96GX1 697 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 ZNF285Q96NJ3 590 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 FCRL4Q96PJ5 515 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 MIPEPQ99797 713 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 DHRS4Q9BTZ2 278 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 GPAMQ9HCL2 828 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 LNPEPQ9UIQ6 1025 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 RARRES3Q9UL19 164 aa18.76■□□□□ 0.59
SHKBP1-221ENST00000599833 NPEPPSL1A6NEC2 478 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 RIPK2O43353 540 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 RAD1O60671 282 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 CTSVO60911 334 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 CD1DP15813 335 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 MAGEA12P43365 314 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 RAB10P61026 200 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 BMPR2Q13873 1038 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 SLMAPQ14BN4 828 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 SF1Q15637 639 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 DEFB110Q30KQ9 67 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 ZNF425Q6IV72 752 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 FIGLAQ6QHK4 219 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 BPHLQ86WA6 291 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 SPATA6LQ8N4H0 392 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 DCAKDQ8WVC6 231 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 CCDC138Q96M89 665 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 SGPP1Q9BX95 441 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 DERL2Q9GZP9 239 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 AKIRIN1Q9H9L7 192 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 SYTL2Q9HCH5 934 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 SH2B3Q9UQQ2 575 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 PCDHB11Q9Y5F2 797 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 IGSF10Q6WRI0 2623 aa18.75■□□□□ 0.59
SHKBP1-221ENST00000599833 OR2A25A4D2G3 310 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 KLK10O43240 276 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 KIAA0754O94854 1291 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 SYF2O95926 243 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 ALDOAP04075 364 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 STMN1P16949 149 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 CYP2A7P20853 494 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 MAP4P27816 1152 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 TBPL1P62380 186 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 MAP7Q14244 749 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 TSNQ15631 228 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 TMTC4Q5T4D3 741 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 AGTRAPQ6RW13 159 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 ZNF517Q6ZMY9 492 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 TRMT10CQ7L0Y3 403 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 RAB42Q8N4Z0 105 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 OR8K5Q8NH50 307 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 OR56A3Q8NH54 315 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 UHMK1Q8TAS1 419 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 MCOLN3Q8TDD5 553 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 PTERQ96BW5 349 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 ACAT2Q9BWD1 397 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 UNKQ9C0B0 810 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 TXNDC16Q9P2K2 825 aa18.74■□□□□ 0.59
SHKBP1-221ENST00000599833 TARM1B6A8C7 271 aa18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 TMEM150CB9EJG8 249 aa18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 RRP8O43159 456 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 ENO2P09104 434 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 RORAP35398 523 aa18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 KCNC1P48547 511 aa18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 ARL4DP49703 201 aa18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 PMS2P54278 862 aa18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 AP1S2P56377 157 aa18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 PRDX1Q06830 199 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 OR4D1Q15615 310 aa18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 ICE2Q659A1 982 aa18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 RNF44Q7L0R7 432 aa18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 PAQR7Q86WK9 346 aa18.73■□□□□ 0.59
SHKBP1-221ENST00000599833 SYTL1Q8IYJ3 562 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms