RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 FASTKD1Q53R41 847 aaKnown RBP14.05□□□□□ -0.16
IRF3-223ENST00000599223 PRAMEF13Q5VWM6 474 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 FRMPD2BQ6IN97 320 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 FIGLAQ6QHK4 219 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 OVCH1Q7RTY7 1134 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 SYCE1Q8N0S2 351 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 ZADH2Q8N4Q0 377 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 TRIM58Q8NG06 486 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 DENND1AQ8TEH3 1009 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 C1orf54Q8WWF1 131 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 ASZ1Q8WWH4 475 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 SELENOSQ9BQE4 189 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 CARD6Q9BX69 1037 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 P2RY12Q9H244 342 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 SLC26A1Q9H2B4 701 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 ATP13A2Q9NQ11 1180 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 ENAMQ9NRM1 1142 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 RAB6BQ9NRW1 208 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 CATSPERZQ9NTU4 200 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 SLC5A6Q9Y289 635 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 COPG1Q9Y678 874 aaKnown RBP14.05□□□□□ -0.16
IRF3-223ENST00000599223 MAU2Q9Y6X3 613 aa14.05□□□□□ -0.16
IRF3-223ENST00000599223 FITM1A5D6W6 292 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 KDM1AO60341 852 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 APOA4P06727 396 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 APRTP07741 180 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 CD63P08962 238 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 ARNTP27540 789 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 FDFT1P37268 417 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 GLRBP48167 497 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 SNX1Q13596 522 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 SF1Q15637 639 aaKnown RBP14.04□□□□□ -0.16
IRF3-223ENST00000599223 CTSL3PQ5NE16 218 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 IGFL2Q6UWQ7 119 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 SPNS2Q8IVW8 549 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 OR11G2Q8NGC1 345 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 PPP4R1Q8TF05 950 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 TM9SF4Q92544 642 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 C5orf34Q96MH7 638 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 CHRAC1Q9NRG0 131 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 TREX1Q9NSU2 369 aa14.04□□□□□ -0.16
IRF3-223ENST00000599223 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.04□□□□□ -0.16
IRF3-223ENST00000599223 STOX2Q9P2F5 926 aaPredicted RBP14.04□□□□□ -0.16
IRF3-223ENST00000599223 TSR3Q9UJK0 312 aaKnown RBP14.04□□□□□ -0.16
IRF3-223ENST00000599223 LOC105369274A0A096LPK9 316 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 LOC102723532A0A0G2JNH3 316 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 A0A1W2PPV9 198 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 VSTM2BA6NLU5 285 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 E7EVH7 732 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 PRMT5O14744 637 aaPredicted RBP14.03□□□□□ -0.16
IRF3-223ENST00000599223 C1orf105O95561 183 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 GAS8O95995 478 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 ALBP02768 609 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 RPN2P04844 631 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 ARSFP54793 590 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 VSX2P58304 361 aaPredicted RBP14.03□□□□□ -0.16
IRF3-223ENST00000599223 GRM7Q14831 915 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 SIX1Q15475 284 aaPredicted RBP14.03□□□□□ -0.16
IRF3-223ENST00000599223 CNSTQ6PJW8 725 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 SLC13A5Q86YT5 568 aaPredicted RBP14.03□□□□□ -0.16
IRF3-223ENST00000599223 PARP9Q8IXQ6 854 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 OR4N4Q8N0Y3 316 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 PPHLN1Q8NEY8 458 aaKnown RBP14.03□□□□□ -0.16
IRF3-223ENST00000599223 OR2L3Q8NG85 312 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 C10orf90Q96M02 699 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 NAPGQ99747 312 aaPredicted RBP14.03□□□□□ -0.16
IRF3-223ENST00000599223 MIPEPQ99797 713 aa14.03□□□□□ -0.16
IRF3-223ENST00000599223 CD3EAPO15446 510 aaKnown RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 NMBRP28336 390 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 STIP1P31948 543 aaKnown RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 RPL22P35268 128 aaKnown RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 SESN2P58004 480 aaPredicted RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 FASTKQ14296 549 aaKnown RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 TMED2Q15363 201 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 RBBP7Q16576 425 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 TUBB8Q3ZCM7 444 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 ZC3H12BQ5HYM0 836 aaKnown RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 AARS2Q5JTZ9 985 aaKnown RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 PTRHD1Q6GMV3 140 aaKnown RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 RNF44Q7L0R7 432 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 KCNMB4Q86W47 210 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 PRSS58Q8IYP2 241 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 SLC35F6Q8N357 371 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 AMER2Q8N7J2 671 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 ST6GALNAC3Q8NDV1 305 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 OR2A1Q8NGT9 310 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 GRHL3Q8TE85 626 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 PEX13Q92968 403 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 SLC22A18Q96BI1 424 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 FAM136AQ96C01 138 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 C8orf44Q96CB5 159 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 CNDP1Q96KN2 507 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 TTC1Q99614 292 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 TSSK1BQ9BXA7 367 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 MRM3Q9HC36 420 aaKnown RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 INTS7Q9NVH2 962 aaKnown RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 SLC39A10Q9ULF5 831 aa14.02□□□□□ -0.17
IRF3-223ENST00000599223 TTC7AQ9ULT0 858 aaPredicted RBP14.02□□□□□ -0.17
IRF3-223ENST00000599223 ZNF148Q9UQR1 794 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms