RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 GRM7Q14831 915 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 DENND6AQ8IWF6 608 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 FKBP10Q96AY3 582 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 NACC2Q96BF6 587 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 PTERQ96BW5 349 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 CCDC68Q9H2F9 335 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 KCNF1Q9H3M0 494 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 SLC22A11Q9NSA0 550 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 C20orf96Q9NUD7 363 aaPredicted RBP17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 G3BP2Q9UN86 482 aaKnown RBP17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 MED16Q9Y2X0 877 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 PTRH2Q9Y3E5 179 aaKnown RBP17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 ZNF451Q9Y4E5 1061 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 MAD1L1Q9Y6D9 718 aa17.19■□□□□ 0.34
CHMP2A-203ENST00000597209 ZNF839A8K0R7 811 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 DSCR3O14972 297 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 ZNF185O15231 689 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 CTSVO60911 334 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 CNOT3O75175 753 aaKnown RBP17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 CATP04040 527 aaKnown RBP17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 ENO3P13929 434 aaPredicted RBP17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 TCP1P17987 556 aaKnown RBP17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 ALAS2P22557 587 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 PSMB5P28074 263 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 FASTKQ14296 549 aaKnown RBP17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 PPP1R7Q15435 360 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 FAM214AQ32MH5 1076 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 ZNF549Q6P9A3 640 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 TTLL10Q6ZVT0 673 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 RNF44Q7L0R7 432 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 PCGF5Q86SE9 256 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 MRGPREQ86SM8 312 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 TTC29Q8NA56 475 aaPredicted RBP17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 SMPDL3AQ92484 453 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 FAM136AQ96C01 138 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 FER1L6-AS2Q96M78 137 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 SLC30A3Q99726 388 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 MIPEPQ99797 713 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 SELENOSQ9BQE4 189 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 FAM167BQ9BTA0 163 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 SLC26A1Q9H2B4 701 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 FBXO6Q9NRD1 293 aaPredicted RBP17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 CUTCQ9NTM9 273 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 ANKMY1Q9P2S6 941 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 PCYOX1Q9UHG3 505 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 DHRS7Q9Y394 339 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 MED13Q9UHV7 2174 aa17.18■□□□□ 0.34
CHMP2A-203ENST00000597209 OR2A25A4D2G3 310 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 KRT87PA6NCN2 255 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 EIF3FO00303 357 aaPredicted RBP17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 DNALI1O14645 258 aaPredicted RBP17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 PGAM1P18669 254 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 ITGAXP20702 1163 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 CMPK1P30085 196 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 OTX2P32243 289 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 SLC1A2P43004 574 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 CD97P48960 835 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 PTK6Q13882 451 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 OVCH1Q7RTY7 1134 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 FDCSPQ8NFU4 85 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 GIMAP7Q8NHV1 300 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 ASB11Q8WXH4 323 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 PCSK5Q92824 1860 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 INPP5DQ92835 1189 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 MIB2Q96AX9 1013 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 PKP4Q99569 1192 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 SMAD5Q99717 465 aaKnown RBP17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 WDR54Q9H977 334 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 TRMT1Q9NXH9 659 aaKnown RBP17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 FBXO5Q9UKT4 447 aa17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 ASH1LQ9NR48 2969 aaKnown RBP17.17■□□□□ 0.34
CHMP2A-203ENST00000597209 GFYI3L273 518 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 PEX12O00623 359 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 KLHL41O60662 606 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 TTC4O95801 387 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 UMODP07911 640 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 SOX8P57073 446 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 IGFBP7Q16270 282 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 WASHC2DQ5SRD0 308 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 CYHR1Q6ZMK1 362 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 GABPB2Q8TAK5 448 aaPredicted RBP17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 NAT9Q9BTE0 207 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 NUDT9Q9BW91 350 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 DDX47Q9H0S4 455 aaKnown RBP17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 C5AR2Q9P296 337 aa17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 TSR3Q9UJK0 312 aaKnown RBP17.16■□□□□ 0.34
CHMP2A-203ENST00000597209 DPM1O60762 260 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 HAUS5O94927 633 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 CCNDBP1O95273 360 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 MCM3P25205 808 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 PNLIPRP1P54315 467 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 EMP3P54852 163 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 VSX2P58304 361 aaPredicted RBP17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 RELAQ04206 551 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 CRYMQ14894 314 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 SLC9A5Q14940 896 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 HSP90AA5PQ58FG0 334 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 DCAF10Q5QP82 559 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms