RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 G3V2L1 256 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 TYROBPO43914 113 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 CTSVO60911 334 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 SYF2O95926 243 aaKnown RBP10.18□□□□□ -0.78
LIG1-210ENST00000596332 HGFP14210 728 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 JUPP14923 745 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 OAS2P29728 719 aaKnown RBP10.18□□□□□ -0.78
LIG1-210ENST00000596332 CRHR1P34998 444 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 HSD17B2P37059 387 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 SNRPNP63162 240 aaKnown RBP10.18□□□□□ -0.78
LIG1-210ENST00000596332 PRDX1Q06830 199 aaKnown RBP10.18□□□□□ -0.78
LIG1-210ENST00000596332 NAE1Q13564 534 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 KCNAB1Q14722 419 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 RTP5Q14D33 572 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 FAM83EQ2M2I3 478 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 PTCHD3Q3KNS1 767 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 MAP9Q49MG5 647 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 SNAP47Q5SQN1 464 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 LGSNQ5TDP6 509 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 CACHD1Q5VU97 1274 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 ZNF425Q6IV72 752 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 TTC23LQ6PF05 361 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 KLHL35Q6PF15 583 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 ADAMTSL2Q86TH1 951 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 TBC1D1Q86TI0 1168 aaPredicted RBP10.18□□□□□ -0.78
LIG1-210ENST00000596332 EXOC3L1Q86VI1 746 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 GPSM1Q86YR5 675 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 CARFQ8N187 725 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 GALNT15Q8N3T1 639 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 D2HGDHQ8N465 521 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 DNAJC22Q8N4W6 341 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 SMPDL3AQ92484 453 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 MOCOSQ96EN8 888 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 ZDHHC12Q96GR4 267 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 TMEM74Q96NL1 305 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 CD180Q99467 661 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 CHRNA10Q9GZZ6 450 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 KLHL25Q9H0H3 589 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 APMAPQ9HDC9 416 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 ENAMQ9NRM1 1142 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 CUEDC1Q9NWM3 386 aaPredicted RBP10.18□□□□□ -0.78
LIG1-210ENST00000596332 ARL15Q9NXU5 204 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 LNPEPQ9UIQ6 1025 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 FRYQ5TBA9 3013 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 KIF26BQ2KJY2 2108 aa10.18□□□□□ -0.78
LIG1-210ENST00000596332 KNTC1P50748 2209 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 A0A0J9YY10 115 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 GSAPA4D1B5 854 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 OR2A25A4D2G3 310 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 TRABD2BA6NFA1 517 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 ISM1B1AKI9 464 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 TK2O00142 265 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 AGRPO00253 132 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 MATN2O00339 956 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 HGSO14964 777 aaPredicted RBP10.17□□□□□ -0.78
LIG1-210ENST00000596332 DLX3O60479 287 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 ERLIN1O75477 346 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 SNRNP200O75643 2136 aaKnown RBP10.17□□□□□ -0.78
LIG1-210ENST00000596332 MT-ND3P03897 115 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 PROCP04070 461 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 KRT4P19013 534 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 ITIH1P19827 911 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 MAGP20916 626 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 MAP4P27816 1152 aaKnown RBP10.17□□□□□ -0.78
LIG1-210ENST00000596332 GCGRP47871 477 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 SEPHS1P49903 392 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 TBPL1P62380 186 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 MC2RQ01718 297 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 PCDH1Q08174 1060 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 E2F2Q14209 437 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 PHF19Q5T6S3 580 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 FAM219BQ5XKK7 198 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 ICE2Q659A1 982 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 SULT1C3Q6IMI6 304 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 LCTLQ6UWM7 567 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 ATG14Q6ZNE5 492 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 TAOK1Q7L7X3 1001 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 PAQR7Q86WK9 346 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 C4orf33Q8N1A6 199 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 ARHGEF39Q8N4T4 335 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 OR4K1Q8NGD4 311 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 UBTD2Q8WUN7 234 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 GATA6Q92908 595 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 GRAMD1AQ96CP6 724 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 TLCD1Q96CP7 247 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 PGM2Q96G03 612 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 CABS1Q96KC9 395 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 ZNF285Q96NJ3 590 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 FCRL4Q96PJ5 515 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 DEPDC7Q96QD5 511 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 MIPEPQ99797 713 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 ACAT2Q9BWD1 397 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 RAB11FIP5Q9BXF6 653 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 SPNS1Q9H2V7 528 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 SYNDIG1Q9H7V2 258 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 TMBIM4Q9HC24 238 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 ASCL3Q9NQ33 180 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 MKS1Q9NXB0 559 aa10.17□□□□□ -0.78
LIG1-210ENST00000596332 CPSF2Q9P2I0 782 aaKnown RBP10.17□□□□□ -0.78
LIG1-210ENST00000596332 XPR1Q9UBH6 696 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 248 ms