RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PIM1P11309 404 aaPredicted RBP22.5■■□□□ 1.19
LSM4-204ENST00000594828 MCM3P25205 808 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 CLCN7P51798 805 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 FASTKQ14296 549 aaKnown RBP22.5■■□□□ 1.19
LSM4-204ENST00000594828 PPP1R7Q15435 360 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 LONRF1Q17RB8 773 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 LMNTD2Q8IXW0 634 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 PPIL6Q8IXY8 311 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 TTC29Q8NA56 475 aaPredicted RBP22.5■■□□□ 1.19
LSM4-204ENST00000594828 FER1L6-AS2Q96M78 137 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 ZNF285Q96NJ3 590 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 NUDT9Q9BW91 350 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 FAM114A2Q9NRY5 505 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 SLC22A11Q9NSA0 550 aa22.5■■□□□ 1.19
LSM4-204ENST00000594828 C20orf96Q9NUD7 363 aaPredicted RBP22.5■■□□□ 1.19
LSM4-204ENST00000594828 TRMT1Q9NXH9 659 aaKnown RBP22.5■■□□□ 1.19
LSM4-204ENST00000594828 TNRC6AQ8NDV7 1962 aaKnown RBP22.5■■□□□ 1.19
LSM4-204ENST00000594828 MED13Q9UHV7 2174 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 TTLL8A6PVC2 850 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 ARHGEF33A8MVX0 844 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 DSCR3O14972 297 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 CATP04040 527 aaKnown RBP22.49■■□□□ 1.19
LSM4-204ENST00000594828 CMPK1P30085 196 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 FAM214AQ32MH5 1076 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 TTLL9Q3SXZ7 439 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 NADK2Q4G0N4 442 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.49■■□□□ 1.19
LSM4-204ENST00000594828 WASHC2DQ5SRD0 308 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 NEK10Q6ZWH5 1172 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 AGGF1Q8N302 714 aaeCLIP22.49■■□□□ 1.19
LSM4-204ENST00000594828 CALML6Q8TD86 181 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 MIB2Q96AX9 1013 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 SLC30A3Q99726 388 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 ENAMQ9NRM1 1142 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 GPR83Q9NYM4 423 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 KLHL42Q9P2K6 505 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 FER1L5A0AVI2 2057 aa22.49■■□□□ 1.19
LSM4-204ENST00000594828 A0A0J9YVX5 310 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 FITM1A5D6W6 292 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 MYO1CO00159 1063 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 ONECUT2O95948 504 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 IGHEP01854 428 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 ERGP11308 486 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 ITGAXP20702 1163 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 SLC1A2P43004 574 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 FOXL2P58012 376 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 VSX2P58304 361 aaPredicted RBP22.48■■□□□ 1.19
LSM4-204ENST00000594828 ARHGAP19Q14CB8 494 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 ZNF549Q6P9A3 640 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 OVCH1Q7RTY7 1134 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 SMPDL3AQ92484 453 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 KCNJ9Q92806 393 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 FKBP10Q96AY3 582 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 ACAT2Q9BWD1 397 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 P4HTMQ9NXG6 502 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 FAM169AQ9Y6X4 670 aa22.48■■□□□ 1.19
LSM4-204ENST00000594828 PCSK5Q92824 1860 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 DPM1O60762 260 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 ALBP02768 609 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 UMODP07911 640 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 HSD17B2P37059 387 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 YBX1P67809 324 aaKnown RBP22.47■■□□□ 1.19
LSM4-204ENST00000594828 NAA25Q14CX7 972 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 DCAF10Q5QP82 559 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 RNASEH2BQ5TBB1 312 aaKnown RBP22.47■■□□□ 1.19
LSM4-204ENST00000594828 FRMPD2BQ6IN97 320 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 SUSD1Q6UWL2 747 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 ATCAYQ86WG3 371 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 HPS6Q86YV9 775 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 CLEC1AQ8NC01 280 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 INPP5DQ92835 1189 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 PKP4Q99569 1192 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 SMAD5Q99717 465 aaKnown RBP22.47■■□□□ 1.19
LSM4-204ENST00000594828 DPH7Q9BTV6 452 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 ZC3H7BQ9UGR2 993 aaKnown RBP22.47■■□□□ 1.19
LSM4-204ENST00000594828 FBXO5Q9UKT4 447 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 MED16Q9Y2X0 877 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 DHRS7Q9Y394 339 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 COMMD10Q9Y6G5 202 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 CCDC88CQ9P219 2028 aa22.47■■□□□ 1.19
LSM4-204ENST00000594828 LOC105369274A0A096LPK9 316 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 LOC102723532A0A0G2JNH3 316 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 HYKKA2RU49 373 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 NRP2O60462 931 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 HAUS5O94927 633 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 RPA3P35244 121 aaPredicted RBP22.46■■□□□ 1.19
LSM4-204ENST00000594828 CD97P48960 835 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 CUL1Q13616 776 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 TSTA3Q13630 321 aaPredicted RBP22.46■■□□□ 1.19
LSM4-204ENST00000594828 RAPSNQ13702 412 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 HSP90AA5PQ58FG0 334 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 FBXO42Q6P3S6 717 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 RNF44Q7L0R7 432 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 PPP1R32Q7Z5V6 425 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 TMEM151BQ8IW70 566 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 OR4N4Q8N0Y3 316 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.46■■□□□ 1.19
LSM4-204ENST00000594828 GIMAP7Q8NHV1 300 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.46■■□□□ 1.19
LSM4-204ENST00000594828 DDX47Q9H0S4 455 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms