RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 FAM69BQ5VUD6 431 aa14.66□□□□□ -0.06
TRIM28-203ENST00000593582 MLIPQ5VWP3 458 aa14.66□□□□□ -0.06
TRIM28-203ENST00000593582 C2CD4AQ8NCU7 369 aaPredicted RBP14.66□□□□□ -0.06
TRIM28-203ENST00000593582 OR2A1Q8NGT9 310 aa14.66□□□□□ -0.06
TRIM28-203ENST00000593582 SMPDL3AQ92484 453 aa14.66□□□□□ -0.06
TRIM28-203ENST00000593582 GPR21Q99679 349 aa14.66□□□□□ -0.06
TRIM28-203ENST00000593582 SELENOSQ9BQE4 189 aa14.66□□□□□ -0.06
TRIM28-203ENST00000593582 AARSD1Q9BTE6 412 aaKnown RBP14.66□□□□□ -0.06
TRIM28-203ENST00000593582 PPANQ9NQ55 473 aaKnown RBP14.66□□□□□ -0.06
TRIM28-203ENST00000593582 NDOR1Q9UHB4 597 aa14.66□□□□□ -0.06
TRIM28-203ENST00000593582 TLK1Q9UKI8 766 aa14.66□□□□□ -0.06
TRIM28-203ENST00000593582 KLK4Q9Y5K2 254 aa14.66□□□□□ -0.06
TRIM28-203ENST00000593582 SPTBP11277 2137 aa14.66□□□□□ -0.06
TRIM28-203ENST00000593582 A0A1W2PPV9 198 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 ARGFXA6NJG6 315 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 DNAJB5O75953 348 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 MPC1LP0DKB6 136 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 ERGP11308 486 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 ALAS2P22557 587 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 CMPK1P30085 196 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 RPA3P35244 121 aaPredicted RBP14.65□□□□□ -0.06
TRIM28-203ENST00000593582 TSTA3Q13630 321 aaPredicted RBP14.65□□□□□ -0.06
TRIM28-203ENST00000593582 FASTKQ14296 549 aaKnown RBP14.65□□□□□ -0.06
TRIM28-203ENST00000593582 GRM7Q14831 915 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 YOD1Q5VVQ6 348 aaPredicted RBP14.65□□□□□ -0.06
TRIM28-203ENST00000593582 TCTN3Q6NUS6 607 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 UGT3A1Q6NUS8 523 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 CD200R1Q8TD46 325 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 ADAMTS17Q8TE56 1095 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 ASB11Q8WXH4 323 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 PKP4Q99569 1192 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 ACAT2Q9BWD1 397 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 ING2Q9H160 280 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 ACSS2Q9NR19 701 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 TRMT6Q9UJA5 497 aaKnown RBP14.65□□□□□ -0.06
TRIM28-203ENST00000593582 TP53TG5Q9Y2B4 290 aa14.65□□□□□ -0.06
TRIM28-203ENST00000593582 A0A1B0GX78 115 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 EIF3FO00303 357 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 TTI1O43156 1089 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 ZBTB14O43829 449 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 SRPX2O60687 465 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 CTSVO60911 334 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 KLF7O75840 302 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 SLC16A8O95907 504 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 SYF2O95926 243 aaKnown RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 SKIV2L2P42285 1042 aaKnown RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 CARSP49589 748 aaKnown RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 PNLIPRP1P54315 467 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 SLC9A5Q14940 896 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 HIF1AQ16665 826 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 HP1BP3Q5SSJ5 553 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 CPZQ66K79 652 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 LRRC8EQ6NSJ5 796 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 HIBCHQ6NVY1 386 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 SUSD1Q6UWL2 747 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 KIAA0408Q6ZU52 694 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 TTLL10Q6ZVT0 673 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 RAB43Q86YS6 212 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 IGDCC3Q8IVU1 814 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 CNTN4Q8IWV2 1026 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 CPNE9Q8IYJ1 553 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 TTC29Q8NA56 475 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 FBXO15Q8NCQ5 510 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 LRRC39Q96DD0 335 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 CERS2Q96G23 380 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 CFAP36Q96G28 342 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 SNF8Q96H20 258 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 NDNQ99608 321 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 TRIM51Q9BSJ1 452 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 TRIM55Q9BYV6 548 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 TAS2R13Q9NYV9 303 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 ZC3H7BQ9UGR2 993 aaKnown RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 ANAPC2Q9UJX6 822 aa14.64□□□□□ -0.07
TRIM28-203ENST00000593582 PTRH2Q9Y3E5 179 aaKnown RBP14.64□□□□□ -0.07
TRIM28-203ENST00000593582 GFYI3L273 518 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 SEC31AO94979 1220 aaKnown RBP14.63□□□□□ -0.07
TRIM28-203ENST00000593582 CCNDBP1O95273 360 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 PIM1P11309 404 aaPredicted RBP14.63□□□□□ -0.07
TRIM28-203ENST00000593582 MCM3P25205 808 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 FOLR3P41439 243 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 ELK3P41970 407 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 RGS4P49798 205 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 CCL11P51671 97 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 ITGA8P53708 1063 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 RRADP55042 308 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 ARL4CP56559 192 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 VSX2P58304 361 aaPredicted RBP14.63□□□□□ -0.07
TRIM28-203ENST00000593582 CHAF1BQ13112 559 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 SSPNQ14714 243 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 FAM214AQ32MH5 1076 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 CYHR1Q6ZMK1 362 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 ASB18Q6ZVZ8 466 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 UBE2R2Q712K3 238 aaPredicted RBP14.63□□□□□ -0.07
TRIM28-203ENST00000593582 GALNT7Q86SF2 657 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 TMEM102Q8N9M5 508 aaPredicted RBP14.63□□□□□ -0.07
TRIM28-203ENST00000593582 ZNF285Q96NJ3 590 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 IP6K3Q96PC2 410 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 KRT12Q99456 494 aa14.63□□□□□ -0.07
TRIM28-203ENST00000593582 DPH7Q9BTV6 452 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms